| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0876 |
|---|
| Symbol | |
|---|
| ID | 4269697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 993753 |
|---|
| End bp | 994745 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638125628 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_741720 |
|---|
| Protein GI | 114320037 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCAG CAGCGGAACC GGTCATCGCC TTGCTGACCG CCATGGACGA GGACGTGCCA
CCGGGGCTGG AGACGCTCTC AGGCCAGGCC CGGCTGATCC ATACCCGTAC GGTGGAGGAG
CTGCGCGACG CCCTGGCCGA GGCGGACATC CTGCTGGTCA CCGACTTCAA TACCGACGTG
GTGGAACGGG CCTGGCCGGC GGCACGCAAG GTCTCCTGGG TCCACGCCAC CTCGGCGGGG
GTCGACCGGC TGCTGTTTCC CGCCCTGCGC GAGAGCGATG TCCCGCTGAC CAACGCCCGC
GGGATCTTCG ACCGCCCCAT CGCCGAGTAT GTGCTGGGGC TGATCCTGCT CTATGCCAAG
GATCTGCACA CCACGCTGGC CCTGCAGCGC GAACACCGCT GGCACCACCG GGATACCGAA
CGCATTGAGG GTCAGCGGGT GCTGGTGGTG GGGGCCGGTT CCATCGGCCG GCAGATCGCC
CGCGCCTGTG GTGCGATGGG CATGCAGGTC ACCGGTATCG CCAGCCGCGA CCGCGACAGC
GACCCCGACT TCCAGGCCGT CTATAGCAAC GACCGGCTGA CCGAGCTGCT GCCGGACCAG
GACTACGTGG TCATTGCCGC TCCGCTCACT CCGGCCACCG AGGGGCTGTT CGACGCCGGG
CTGTTCCGGC GGATGGCCAC GCACGCCCGG CTGATCAACA TCGGGCGCGG CCCGATCGTC
CGCACCGATG ACCTGGTGGC GGCTCTGCGG GCCGGCGAGC TGGCCGGCGC GGCCCTGGAT
GTCTTCGAGG ATGAGCCGCT ACCGGCCGAC CACCCCTTGT GGGACCTGGA CAATGTGGTG
ATCTCTCACC ACATGGCGGG TGATGTGGTG GGCTGGCGCC GGGCGCTCTC TGAGCAGTTC
ATCGCCAACT TCCATTGCTG GCGCCAGGGC GAACCCCTGC TCAACCAGGT GGACAAGGGA
CGCGGCTACG TACCGCCCTC CCCCGGCACC TGA
|
|---|
| Protein sequence | MPAAAEPVIA LLTAMDEDVP PGLETLSGQA RLIHTRTVEE LRDALAEADI LLVTDFNTDV
VERAWPAARK VSWVHATSAG VDRLLFPALR ESDVPLTNAR GIFDRPIAEY VLGLILLYAK
DLHTTLALQR EHRWHHRDTE RIEGQRVLVV GAGSIGRQIA RACGAMGMQV TGIASRDRDS
DPDFQAVYSN DRLTELLPDQ DYVVIAAPLT PATEGLFDAG LFRRMATHAR LINIGRGPIV
RTDDLVAALR AGELAGAALD VFEDEPLPAD HPLWDLDNVV ISHHMAGDVV GWRRALSEQF
IANFHCWRQG EPLLNQVDKG RGYVPPSPGT
|
|---|
| |