| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0665 |
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| Symbol | |
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| ID | 4268277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 726956 |
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| End bp | 730111 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638125414 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_741509 |
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| Protein GI | 114319826 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCT TGCGCAAACC GGGCCACGGC CCCGCCCTGA CCATCTGCCT GGCCTACGCG
GCGCTCGGGC TGCTGTGGAT TTTCGGCTCA GACCGCCTGT TGCTGGTGCT CATAGAGGAC
ACCGAGCTGG TGGCCCGGCT GCAAACCGCC AAGGGCTGGT TCTACGTGCT GGTGACCGCC
GGGCTGCTCT ACCTAGTGAT CCGCTTTACC ATCAACACCA CCCGGCTGGA AGAGCAGGCC
CGGCGCCCTC GCGCCCCTGA TTCCGACCTG CTCCCCGTTG CCGGCGACTA CTGGGTGCCC
GTGGGCATCC TGACCGGGCT CGCCGGCGGA TTGGCGGCGC TCGGTTACCT CTTCTACCAC
CAGGTCTCCA GTACCCCCAC GCCCCCGCCG GAAGCGGATA TCCGGCACCT GGCGCGCTGG
AGCTTCACCA CCGGTCTGCT GCTGGTGGTC GCAGCGGGCA CGGGCATCAT CCTCTGGTGG
CGGGGCCATG TGCACGGTCT GGAGGCCCGA CGGCTACGCA CCGAGTTGAT GGCGCAGGCC
GACCTCGCCG CGCGAGAGCG GGCCTACGAG ACCCTGGCGG AAAACTCACC CGACATCATC
GTCCGACTCG ACCGCGACCT CCGGCATCTC TACGTCAACC GTGCCCTGGA GGCGTTCACC
GGCATCCCGC GGGAGCACTA CCTGGGCCGA ACACACGAGG AGGTCGGCTT CCGCGGCAAA
CTGCTCGCGA CCTGGGAGCG GCACCTGAAC CAGGCGCTGG AAAGCGGCGA ACCCGGGACC
ATGACCTTTT CCCATCCGGA CCGCGAGGGC CGGGTCCGCC ACTTCGAGGC GCTGATCGTC
CCGGAGACCG ATGACACCGG CAATATCGCC CATGTGCTCT GTATCAGCCA CGACGTGACC
GGCCACGTCC AGGCCCGCGA GGAGATCAGC CGACTGCGCG ATCTCTACGC TGCCCTCAGC
CAGGCCAATC AGGTCATCAT CCGTATCGAC GACCCCAAGG AATTGTTCCA GCGGACCTGC
GAGGTGGTGG TCCGGTATGG CCGACTCGAC ATGGCCTGGA TCGGGTTGGT GGATCAGGCC
AGTGGCCGCG TCACCCCGGT GAGCCGGGCC GGTCGCGACA TGGGTTATCT GGACGAGATC
CGTATCAGTA CCGATCCTGC GCGCCCGGAG AGCCGGGGCC CGGTAGGACG CGCCATCCGC
CAGCGGCGGG CCAGCGTGTT CGACCGGTTC CTGGATCACC CGGACGCCGG CCCCTGGCAG
GCCGCCGCGG CCCGCCGCGG GTTTCGCTCG GTCGCCGCCT TCCCCCTGTT CCAGAGCGAC
GACTGCATCG GCGCATTGGC CGTCTACTCC AGCGAGGAGC GCTTTTTTAG CGCGGATATC
ATCCAGCTCA TGGCGGAGAT GACCGGGGAC CTCTCGTTCG CGCTGGACAA CATAGAGCGG
GAACAGGCCC GCAAGGCGGC CGAAGAGCAG ATGCGCCTGG CCGAGGAGGT GTTCGAGCAC
AGCACCGAGG CCATCATCAT CACCGATGCC AGACAGCGGA TAATGCGGGT GAACCGGGCC
TTCACTGAAC GCACCGGCTA TGTCCCCGAC GAGGTGCTCG GCCGGCGCCC GCACATGCTC
CGCTCCCCCC ACCACACGCA ACAGTTCTAC CGCCGTATAC TCGCCCGGCT CCGCCGCCAC
GGCTTTTGGG AAGGCGAGAT CTGGAACCGG CGCAAGGGGG GCGAAAACGC GCCCCTTTGG
CTCACCCTAT CGGTGGTCCG GGACGAGGCA GGGCGGATCA CCCACTATAT CGCGGTAGGC
CTTGACCTTA CCGAGACCAA GGATCGCGAG GCGCACATCC GCTACCTGGC CCAGCACGAT
CCGGTCACCG GGCTGCCCAA TCGCGGGTTG CTCGCCGACC GATTGGGACA GGCGTTGCGC
CGCGCCCAGG ACCAGCACTA CCGGCTGGCC CTGCTGTCGC TGGACCTCGA CCGTTTCAAG
ATCATCAACG AAACCCTTGG TCATGTGGCC GGTGACGAGG TGCTGCAAAC GGTGGCGCAG
CGCCTGCAAG ACCACGTGAA CGGGGCGGGC ACGGTCTCCC GGATCGGCAG CGATCAGTTT
CTGATCCTGC TGCCGGAGAT CCACAAGCCC ACCGAGGCGG CCCAAGCCGC CGAACGCCTG
ATGGCCTGCG TCGCCGAGCC ACTGGACCTG AGCGGACAGG AGCTGACCCC CTCCAGCGTC
GTGGGCATCG CACTCTACCC CGAAGACGGG GATAACCTCG AGACCCTGCA CAGTCACGCG
GATGCGGCCA TGTCGATGGC CAAACAGGCC AGTGGCCATG AGGGCTACCG CTTTTTCAGC
AGCGACATGA CCAGCCGCGC CCGCGAGCGC CTGTCGCTGG AGAGCCGGCT GCGCCGCGCA
CTGGACCGGG GTGAATTCCG CCTACATTAC CAGCCGCAGG TAAGCCTGGC CGACGGCACC
CTCACCGGAA TGGAGGCCCT GCTGCGTTGG CACGCCGGGG ACGAGGGCGA CATCTCACCG
GCGCGCTTCA TCCCCATCGC CGAGGAGACG GGGCTGATCG TCCCACTGGG CCGCTGGGTG
CTCGGCGAGG CCTGCCGCCA GAACCGCGCC TGGCGGCAGG CCGGGCTTCC CGCCCTACCG
GTCTCGGTGA ATCTATCGGT GGTCCAGCTC CGTCGCAGCG ACGTGGTCGC AGACGTGCGC
CGGGCACTGG AGACCAGCGG CCTGCCTGGT GACGGGCTCC ACTTGGAGGT CACCGAAAGC
CTCTTTTTGA GTGAGGACGA CCCGGCGGTG GTCACCGGTT TCCAGACCCT TCGGGAAATG
GGCATCAGTC TGGCCATTGA CGATTTCGGG ACCGGTTATT CCAACCTCGG CTATCTCAAG
CGATTGCCCA TCGCCAAGCT GAAGATTGAC CAATCCTTCG TCCGCGGCAT AGGCGACAGC
GGCCACGACA CAGCGATCAA CCAGGCCATC ATCAGCATCG CCCGCAGCCT TGGCCTTGGG
GTCATCGCCG AAGGGGTGGA GACCGCGGCC GAGTTACGGG TATTACAGGC GCTGGGCTGC
GACGAAATCC AAGGCTTTTA CTACAGCCGC CCGCTGGATG CGGAGCGCGC CGGCCAACTG
ATGGCGGCTC CACCCCCACT GCATCATGGG GCCTGA
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| Protein sequence | MPALRKPGHG PALTICLAYA ALGLLWIFGS DRLLLVLIED TELVARLQTA KGWFYVLVTA
GLLYLVIRFT INTTRLEEQA RRPRAPDSDL LPVAGDYWVP VGILTGLAGG LAALGYLFYH
QVSSTPTPPP EADIRHLARW SFTTGLLLVV AAGTGIILWW RGHVHGLEAR RLRTELMAQA
DLAARERAYE TLAENSPDII VRLDRDLRHL YVNRALEAFT GIPREHYLGR THEEVGFRGK
LLATWERHLN QALESGEPGT MTFSHPDREG RVRHFEALIV PETDDTGNIA HVLCISHDVT
GHVQAREEIS RLRDLYAALS QANQVIIRID DPKELFQRTC EVVVRYGRLD MAWIGLVDQA
SGRVTPVSRA GRDMGYLDEI RISTDPARPE SRGPVGRAIR QRRASVFDRF LDHPDAGPWQ
AAAARRGFRS VAAFPLFQSD DCIGALAVYS SEERFFSADI IQLMAEMTGD LSFALDNIER
EQARKAAEEQ MRLAEEVFEH STEAIIITDA RQRIMRVNRA FTERTGYVPD EVLGRRPHML
RSPHHTQQFY RRILARLRRH GFWEGEIWNR RKGGENAPLW LTLSVVRDEA GRITHYIAVG
LDLTETKDRE AHIRYLAQHD PVTGLPNRGL LADRLGQALR RAQDQHYRLA LLSLDLDRFK
IINETLGHVA GDEVLQTVAQ RLQDHVNGAG TVSRIGSDQF LILLPEIHKP TEAAQAAERL
MACVAEPLDL SGQELTPSSV VGIALYPEDG DNLETLHSHA DAAMSMAKQA SGHEGYRFFS
SDMTSRARER LSLESRLRRA LDRGEFRLHY QPQVSLADGT LTGMEALLRW HAGDEGDISP
ARFIPIAEET GLIVPLGRWV LGEACRQNRA WRQAGLPALP VSVNLSVVQL RRSDVVADVR
RALETSGLPG DGLHLEVTES LFLSEDDPAV VTGFQTLREM GISLAIDDFG TGYSNLGYLK
RLPIAKLKID QSFVRGIGDS GHDTAINQAI ISIARSLGLG VIAEGVETAA ELRVLQALGC
DEIQGFYYSR PLDAERAGQL MAAPPPLHHG A
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