| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0584 |
|---|
| Symbol | rpsR |
|---|
| ID | 4268318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 633744 |
|---|
| End bp | 633968 |
|---|
| Gene Length | 225 bp |
|---|
| Protein Length | 74 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638125327 |
|---|
| Product | 30S ribosomal protein S18 |
|---|
| Protein accession | YP_741428 |
|---|
| Protein GI | 114319745 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0238] Ribosomal protein S18 |
|---|
| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.501506 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 6.40936e-16 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCT TTTTCCGCCG CCGCAAGTAC TGCCGTTTCA CCGCCGAGGG TGTGAAGGAG
ATCGACTACA AGGATCTCAA CACCCTGCGC AACTACGTCA CCGAGACCGG CAAGATCGTC
CCCAGCCGGA TCACCGGCAC CAGTGCCCGT TACCAGCGCC AGCTGGCCCG GGCCATCAAG
CGGGCCCGGT ACCTGGCCCT GCTGCCGTAC ACCGATCGCC ACTGA
|
|---|
| Protein sequence | MARFFRRRKY CRFTAEGVKE IDYKDLNTLR NYVTETGKIV PSRITGTSAR YQRQLARAIK
RARYLALLPY TDRH
|
|---|
| |