| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0500 |
|---|
| Symbol | |
|---|
| ID | 4268436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 548323 |
|---|
| End bp | 549564 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638125241 |
|---|
| Product | restriction modification system DNA specificity subunit |
|---|
| Protein accession | YP_741344 |
|---|
| Protein GI | 114319661 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.565018 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATC TCAGTTGGCC AGATGTCAGT CTCGGGAATA TATTCACCAT CAACACTAGT
GCGGTGATCC CGAATGCGGC CCCCAATACC GAGTTCTATC ACCATAGCCT GCCCGCTTGG
GACGCCACAG GGGGACCTAC GGTGGAAAAA GGCTCTTCGA TCGAAAGCAA TAAAGTCAAT
ATCACCAAGC CTTGCGTGCT GGTTTCAAAG TTGAACCCAA GGAAACCTCG GGTATCTGTG
CTTGAATCGG TGGGAAAAGA CGAGCGTCAT TGCGCCTCAA CAGAATTCGT TTGTCTTGAA
CCAAAAGCCA AAGAGCACCT CAGGTTCTGG GGCCATCTTT TTTCGAACAA GAGGTTTGCA
GGCCACCTTG ATCGCATGGC TATTGGTTCG ACCAATAGCC ACAAACGGTT TAGCCCCGGG
GTGCTCTTGT CCTTAAGGAT TGAGCTGCCC TCAGAGCCGG AAAGGAGGCT GATTGCCCGA
ATCCTCGACA CCCTCGACAC CCAGATCCAG AAAACCGAGG CGCTTATTGC CAAGCTGGAG
AAGGTCAAGG AAGGCCTGCT CCACGACCTG CTGACCCGCG GCATCGACGA CAACGGCCAG
CTACGCCCCA GCCCCGAGCA GGCACCGGAG CTCTACAAGG AATCGCCGCT GGGGTTGATT
CCGAGGGAGT GGAACGCAGT CAGGCTTTAT GAAATGGCGG AAAATCATGA TGGACAGCGA
ATTCCGCTCA AAAAGTCGGA GCGCAAACAT GGCACATATC CATACTATGG AGCCTCCGGG
ATAATTGATT GGGTTGAGGG ATATCTATTT GAAGGAAGCT ATGTTCTTCT TGGGGAGGAT
GGTGAGAACG TTGTATCTAG GAACTTGCCG TTGGCATTCC CTGTTACTGG AAGGTTCTGG
GTGAATAATC ATGCGCACAT ATACTCTCCA AAAGATGACT GCGACACCCG GTTCTTGGTT
GAGGTGCTTG AGCAAAAGGA TTATTCGCGC TGGGTAAATG GTTCGGCCCA GCCGAAAATA
ACGCAAGCAT CATTGAGAAT GATGTGGTTC TGCAAGCCAC CAACGGCTGA GCAGAAGGCT
ATCTCAAATA GCCTTGAGGC AATCAATCAG CAGATTGACG AAGAGAAGAT CAAGATTGCC
AAAGTGAGAA CGCAAAAAGC AGGGGTCATG GACGACCTGC TAACCGGCCG CGTCCGCGTC
ACCCCCCTTC TCGACAAGGC CCAGGCCACG ACGCCAGCAT AA
|
|---|
| Protein sequence | MSDLSWPDVS LGNIFTINTS AVIPNAAPNT EFYHHSLPAW DATGGPTVEK GSSIESNKVN
ITKPCVLVSK LNPRKPRVSV LESVGKDERH CASTEFVCLE PKAKEHLRFW GHLFSNKRFA
GHLDRMAIGS TNSHKRFSPG VLLSLRIELP SEPERRLIAR ILDTLDTQIQ KTEALIAKLE
KVKEGLLHDL LTRGIDDNGQ LRPSPEQAPE LYKESPLGLI PREWNAVRLY EMAENHDGQR
IPLKKSERKH GTYPYYGASG IIDWVEGYLF EGSYVLLGED GENVVSRNLP LAFPVTGRFW
VNNHAHIYSP KDDCDTRFLV EVLEQKDYSR WVNGSAQPKI TQASLRMMWF CKPPTAEQKA
ISNSLEAINQ QIDEEKIKIA KVRTQKAGVM DDLLTGRVRV TPLLDKAQAT TPA
|
|---|
| |