| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0451 |
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| Symbol | rpoB |
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| ID | 4270799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 504991 |
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| End bp | 509058 |
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| Gene Length | 4068 bp |
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| Protein Length | 1355 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638125191 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_741295 |
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| Protein GI | 114319612 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTACT CGTTCACCGA AAAGAAGCGC ATCCGCAAGG ACTTCGGCAA GCTGCCGAAC
ATCCTCGAAG TGCCTTACCT GCTGGCGACG CAAATCGACT CCTATCGTCA GTTCCTTCAG
GAGGAGAGGG CCGCGGAGAG CCGCGAGGAC GTCGGGCTGC ACGGTGCCTT CCGCTCCGTG
TTCCCCATCA CCAGCCACTC CGGGACGGCT GCCCTGGAGT ACGTCAGCTA TCGCATCGGT
GACCCTGGCT TTGATGTCAA GGAGTGCCAG TCGCGCGGTC TGACCTACGC GGCGCCGCTG
CGTATGCTGG TACGCCTGGT CATCTACGAC AAGGACGGTC AGTCCGTAAA GGACATCAAG
GAACAAGAAG TGTACATGGG CGAACTGCCG CTCATGACCC GCAACGGCAC CTTTGTGATC
AATGGCACCG AGCGGGTGAT CGTCTCCCAG CTTCACCGCT CCCCGGGTGT GTTCTTCGAC
CACGACAAGG GCAAGACCCA CTCGTCGGGC AAGCTGCTGT TTTCCGCCCG GGTAATCCCC
TACCGCGGTT CCTGGCTGGA CTTCGAGTTC GATCCCAAGG ACAACATCTA CGTGCGCATC
GACCGTCGCC GCAAGCTGCC GGCGACCATC CTGCTGCGCG CGCTGGGCTT TGACACCCAG
CAGATCCTGG ACCTGTTCTT CGACAAGAAC GCCTTCCACT TCCGCGACGA CGGCTCGGTG
GTGCTCGACC TGGTGCCGGA GCGCCTGCGC GGTGAGACCG CGGCCTTCGA CATCAAGGCC
AACGGCCAGG TGCTGGTGGA GGCCGGGCGC CGAGTGACCG CGCGCCACAT CCGCGAACTG
GGCAAGGCCG GGGTGGACAC GCTGGAGGTC CCGGCCGAGT ACTTGGAGGG CAAGATCGTC
GCCCACGACG TGGTCGACAC CGGGACCGGC GAGATCATCT GTGAAGCCAA CACGGAGCTC
ACTGCCGAGC TGGTGCAGGC CATCCAGGAT GCCGGTGTCA AACAGCTCGA TACCCTGTTT
GTCAACGACC TGGACCGCGG GCCTTACATG TCCCAGACCC TGGCCATCGA TCCGACGCGC
ACCCAGCTGG AGGCGCTGGT CGAGATCTAC CGCATGATGC GCCCGGGTGA GCCGCCCACC
AAGGAGGCGG CCGAGAACCT GTTCCAGAAC CTGTTCTTCA GCCCGGACCG CTACGACCTG
TCGCCGGTCG GGCGCATGAA GTTCAACCTG CGCGTCGGGC GGGACGAGGT CACCGGCCCC
GGGGTGCTGG ACAATGACGA CATCCTCGCG GTGCTGCGGG AACTGATCAA CATCCGCAAC
GGCGACGGCC AGGTGGACGA CATCGACCAC CTGGGCAACC GCCGCGTGCG CTGTGTCGGC
GAGATGGCGG AGAACGTCTT CCGCGTGGGC CTGGTCCGTG TGGAGCGCGC CGTGCGCGAG
CGGCTGTCGC TGGCCGAGAG CGAGGGGTTG ATGCCGCAGG AGTTGATCAA CGCCAAGCCG
GTGGCGGCGG CGATCAAGGA GTTCTTCGGC TCCTCCCAGC TCTCGCAGTT CATGGACCAG
AACAACCCGC TCTCCGAGGT GACCCACAAG CGCCGGGTCT CGGCGCTGGG CCCGGGCGGT
CTGACCCGGG AGCGGGCCGG GTTCGAGGTG CGCGACGTGC ACCCCACCCA CTACGGCCGG
GTCTGCCCCA TCGAAACCCC GGAAGGCCCC AACATCGGGC TGATCAACTC GCTGGCGACT
TACGCCCGGA CCAACCGCTA TGGCTTCCTG GAGACGCCGT ACCGCCGGGT GGAGAATGGC
GTGGTCACCG ACAAGGTGGA TTACCTCTCC GCCATCGAGG AGGCGCGCTA CGTCATCGCC
CAGGCCAACG CCCGCGTGGG TGAGGACGGC CGGCTGATGG ACGAGCTGAT CTCCATCCGC
CACGGCAATG AGTTCGGCAT GGCGACCCCG GACAAGGTCC AGTACATGGA CGTCTCGCCG
AAGCAGATCG TCTCGGTGGC CGCCTCGCTG GTGCCCTTCC TGGAGCACGA CGACGCCAAC
CGTGCGTTGA TGGGCTCCAA CATGCAGCGC CAGGCGGTGC CGACCCTGCG CGCCGACAAG
CCGCTGGTGG GCACCGGTAT GGAGCGGGCC GTGGCGCGCG ACTCCGGCGT CATCGTCACC
GCGGAGCGGG GCGGCGTGGT CGAGCAGGTG GACGCCGGTC GTATCGTGGT CCGGGTCAAC
GACGACGAGA CCGAGGCGGG CGAGCCGGGG GTGGACATCT ACAACCTGGT CAAATACCTG
CGCTCCAACC AGAACACCTG CATGAACCAG AAGCCGCTGG TGCGCCCGGG CGACGTGGTG
GCCCGGGGCG ATGCGCTCGC CGACGGCCCG TCCACCGACA TGGGCGAGCT GGCGCTGGGC
CAGAACATGC TGGTGGCCTT CATGCCGTGG AACGGTTACA ACTTCGAGGA TTCGATCCTG
ATCTCCGAGC GGGTGGTGAA GGAGGACCGC TACACCACCA TCCACATCGA GGAGCTCACC
TGTGTCGCGC GCGACACCAA GCTCGGTACC GAGGAGATCA CCGCCGACAT CCCCAACGTC
TCCGAGTCGG CGCTGAACCG GCTGGACGAG GCCGGCATCG TGCACATCGG GGCCGAGGTG
AAGGCCGGCG ACATCCTGGT GGGCAAGGTC ACGCCCAAGG GCGAGACCCA GCTGACGCCC
GAGGAGAAGC TGCTGCGCGC GATCTTCGGC GAGAAGGCCT CGGACGTGAA GGACACCTCC
CTGCGGGTCC CCACCGGCAT GGACGGCAAG GTGATCGACG TCCAGGTCTT CACCCGGGAC
GGGGTGGAGA AGGACAGCCG GGCGCTGGCC ATCGAGCAGG CAGAGCTGGC GGCCATCCGC
AAGGACCTGC GCGACCAGGA GCGTATCTTC GAGGACGATG CCTTCTCCCG CCTGGAGCGC
GCGCTGGTGG GCCAGGTGGC TGAGGGCGGC CCCTCCGGGT TGGCCCGGGG CGCCGAGGTA
ACCGCCGACT ACCTGGCGAA CCTCGACCGC AAGCGCTGGT TCGAGATCCG CATGCGTGAC
GAGGAGGCCA ACCGCCAGTT GGAGGCCGTA CGGGCCCAAC TGGAGGCGCA GCGTGACTCG
CTGGAGCGCC ACTTCGAGGA GAAGAAGGGC AAGATCACCG CCGGTGACGA CCTCGCCCCG
GGCGTGGTCA AGATGGTCAA GGTCTACCTG GCCGTGCGCC GGCGCCTGCA GCCCGGTGAC
AAGATGGCTG GCCGCCACGG TAACAAGGGC GTCATCTCCA TGATCGTGCC GGAAGAGGAC
ATGCCCTTCA CCGAGGATGG CGAGCCGGTG GACGTGGTCC TCTCGCCGCT GGGTGTGCCC
TCGCGCATGA ACGTCGGGCA GGTGCTGGAG ACCCACCTGG GCTGGGCGGC GCGCGGGCTC
GGCAAACGCA TCGGCGAGAT GCTCGAGCAG CACACCAAGA TGCAGGAGCT GCGTGCGTTC
CTCGACCAGG TGTACAACGC CAGCGGCCAG AAGGTGGACC TGGACAGCCT CGACGACGAG
GAGATCAAGG GCCTCGCCTT CAATCTGCGG GAGGGTGTGC CCATGGCGAC GCCGGTCTTC
GACGGGGCCC AGGAGCCGGA GATCAAAAAC ATGCTCGAGC TCGCGGGGCT GCCCGAGTCC
GGCCAGGCCA CCCTGTACGA CGGTCGTACC GGCGAGGCGT TCGACCGCCC GGTCACCATC
GGCTACATGT ACATGCTGAA GCTCAACCAC CTGGTGGATG ATAAGGTTCA CGCCCGCTCC
ACCGGGCCGT ACTCCCTGGT CACCCAGCAG CCGCTGGGCG GTAAGGCGCA GTTCGGCGGT
CAGCGCTTCG GCGAGATGGA GGTCTGGGCA CTGGAGGCCT ACGGCGCGGC CTACACCCTG
CAGGAGATGC TGACGGTGAA GTCCGACGAC GTGGCAGGCC GAACCAAGAT GTACAAGAAC
ATCGTGGACG GCGACCATCG CATGGAGGCC GGCATGCCCG AGTCCTTCAA CGTGCTGGTC
AAGGAGATCC GCTCGCTGGG CATCAACATC GAGCTGGAAC AGGACTGA
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| Protein sequence | MAYSFTEKKR IRKDFGKLPN ILEVPYLLAT QIDSYRQFLQ EERAAESRED VGLHGAFRSV
FPITSHSGTA ALEYVSYRIG DPGFDVKECQ SRGLTYAAPL RMLVRLVIYD KDGQSVKDIK
EQEVYMGELP LMTRNGTFVI NGTERVIVSQ LHRSPGVFFD HDKGKTHSSG KLLFSARVIP
YRGSWLDFEF DPKDNIYVRI DRRRKLPATI LLRALGFDTQ QILDLFFDKN AFHFRDDGSV
VLDLVPERLR GETAAFDIKA NGQVLVEAGR RVTARHIREL GKAGVDTLEV PAEYLEGKIV
AHDVVDTGTG EIICEANTEL TAELVQAIQD AGVKQLDTLF VNDLDRGPYM SQTLAIDPTR
TQLEALVEIY RMMRPGEPPT KEAAENLFQN LFFSPDRYDL SPVGRMKFNL RVGRDEVTGP
GVLDNDDILA VLRELINIRN GDGQVDDIDH LGNRRVRCVG EMAENVFRVG LVRVERAVRE
RLSLAESEGL MPQELINAKP VAAAIKEFFG SSQLSQFMDQ NNPLSEVTHK RRVSALGPGG
LTRERAGFEV RDVHPTHYGR VCPIETPEGP NIGLINSLAT YARTNRYGFL ETPYRRVENG
VVTDKVDYLS AIEEARYVIA QANARVGEDG RLMDELISIR HGNEFGMATP DKVQYMDVSP
KQIVSVAASL VPFLEHDDAN RALMGSNMQR QAVPTLRADK PLVGTGMERA VARDSGVIVT
AERGGVVEQV DAGRIVVRVN DDETEAGEPG VDIYNLVKYL RSNQNTCMNQ KPLVRPGDVV
ARGDALADGP STDMGELALG QNMLVAFMPW NGYNFEDSIL ISERVVKEDR YTTIHIEELT
CVARDTKLGT EEITADIPNV SESALNRLDE AGIVHIGAEV KAGDILVGKV TPKGETQLTP
EEKLLRAIFG EKASDVKDTS LRVPTGMDGK VIDVQVFTRD GVEKDSRALA IEQAELAAIR
KDLRDQERIF EDDAFSRLER ALVGQVAEGG PSGLARGAEV TADYLANLDR KRWFEIRMRD
EEANRQLEAV RAQLEAQRDS LERHFEEKKG KITAGDDLAP GVVKMVKVYL AVRRRLQPGD
KMAGRHGNKG VISMIVPEED MPFTEDGEPV DVVLSPLGVP SRMNVGQVLE THLGWAARGL
GKRIGEMLEQ HTKMQELRAF LDQVYNASGQ KVDLDSLDDE EIKGLAFNLR EGVPMATPVF
DGAQEPEIKN MLELAGLPES GQATLYDGRT GEAFDRPVTI GYMYMLKLNH LVDDKVHARS
TGPYSLVTQQ PLGGKAQFGG QRFGEMEVWA LEAYGAAYTL QEMLTVKSDD VAGRTKMYKN
IVDGDHRMEA GMPESFNVLV KEIRSLGINI ELEQD
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