Gene Mlg_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0396 
Symbol 
ID4269974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp442315 
End bp442815 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content72% 
IMG OID638125126 
Producthypothetical protein 
Protein accessionYP_741240 
Protein GI114319557 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.548723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCG CAGTGAATGA CGCCCCCGCC CTGGACCTGG AGGTCCAGTA TGTGGTGGCG 
TGGCGGGCCG GGTTGCCACC GGAGGCGGCG TTCCGCCGTT GGGTGAGCGC GGCCCTGGCG
GCCGGGGGGC ACACGGGCCC CGCGGCGCTG GCGGTCCGGG TGGTGGACAA GGCCGAGGGC
CGCCGGCTCA ATCACGATTA CCGGGGCAGG GACTACCCGA CCAACGTGCT CTCCTTCCCC
TTTGAGGCGC CCCCGGGGCT GGACGAGCCC TTGCCCGAGC TGGGCGATCT GGTGATCTGC
GCCCCGGTGG TGGAGCGGGA GGCCCGCGAG CAGGGCAAGC CCGAGGCCGA TCACTGGGCC
CACCTGGTGG TCCACGGCGT GTTGCACCTG CTGGGCTACG ATCACGAGGC GGCGGAGGAG
GCCGAGGCGA TGGAGGGGCT GGAGCGGCGG ATCCTGGCCG GCCTGGGTAT TGCCGACCCC
TACCGCCTTG ACGAACAATA A
 
Protein sequence
MTAAVNDAPA LDLEVQYVVA WRAGLPPEAA FRRWVSAALA AGGHTGPAAL AVRVVDKAEG 
RRLNHDYRGR DYPTNVLSFP FEAPPGLDEP LPELGDLVIC APVVEREARE QGKPEADHWA
HLVVHGVLHL LGYDHEAAEE AEAMEGLERR ILAGLGIADP YRLDEQ