| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0280 |
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| Symbol | |
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| ID | 4269309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 321692 |
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| End bp | 323446 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638125005 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_741125 |
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| Protein GI | 114319442 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAG ACCGCCTGAC ACCATGGCGC CGGCTTGGTA TCGGCCACCG GCTGCTCCTG
TCGCTCACCG CTTTGGCGGT GCTGGCCGGC TGCGCGTCCG TCGCCCCCGA CTCCGCGCCC
ACCCCCGTTG AGCCGCCCGT CGCGGTGGTC AGCGACTTGC CCCCCTGGGA GGACGACCCC
AAGGCGCGGC TGCTCTACAC CATGATGGTG GCCGAGATGG CGCGCCACCG CGGCGACGCC
GACCAGGCCC TGGCCGCCTA TCTGGAGGCC ATGCATCTTA CCCGGGATAC CCGGCCGGCT
GAACAGGCCG CGCAGCTGGC GATCATCCAG GGGCGGCTCG ACGATGCCCT GGCGGCGCTG
CAGCGCTGGG ATGCCCTGGA TGACGACAAC GCCGAGGTGG ATCGGCTGCT GGGGTTGTTG
CACCTGCGCG CCGGCGAGCC CGATCGTGCT TACCACCACC TGTCGCGCTA CCTGGAGACG
TTGGACGGCG AGGTGCGCCA GGCCTTTCAA GGGCTGGGTG AGCTGATGGG CCGTGAGGCG
CGGGCGGACG ACGTACTCCA GGTGCTGGAG CGGTTGGCGG ATGAGTACGC CGGCCACGCC
AGCGCGCAGG TGGCGTTGGC CCGGGCGGCC ATGCAACTGG GGCGCCTGGA GACTGCCCTG
GAGGCGTCCC GCCGAGCCGC CGAGCTGGAC CCGGACTGGC AGGCGCCGCG GATGCTGGAG
GTGCAAGCGC TGGTCAACCT AGACCGGCCC GAGGCCGCCC TGGACGTGGT GGAGGCGCTG
CTGGCCCAGG ATGCCGAGGA CCGCAGCCTG CGGATGCTGC ACGCCCGTCT GCTGGTCAAC
ATGGGGCATC GCGAGCGCGC CCTGGAGGAG TTCGAGGTGT TGATGGCGCA GCGCCCCGAT
GACCTGGAGG TGGCCTATGC GGCAGCCCTT CTCGCCACCG ACCTGCGCCG CTGGGACCAG
GCCCGAGAAT ACTGGCAGTT CATTGCCAAG CGGGCCTATC AGCGTGCCGA GGCCTTTTAC
CGTCTGGGCC GCATCGCCGA GCAGGAGGGT AACCGGGAGG AGGCGCGTGC CTGGTACGAG
CGGGTGCCCG GTGAGTATTG GACCGACGCG CAACTGGCGC TGGCGCGCAT GGAGATGGAC
GACGGCCGCG AAACGCAGGC CCGGGAGCGG CTGGCGGCGG TGCGCGAGCA ACGCCCGGCG
GAGCGCACCC GGGCCTGGAC CCAGGAGGCC CATCTGTTGT CCGGTCAGGG CCGGGCCGGA
GAGGCGGTGG CGTTGCTCGA TGACGCCCTG GAGGCGGAGC CGGGGGACCA CAGCCTGCTC
TACGCCCGTG CCCTGGCGCG GGTGGAGACG GGGGATCTGG CCGGGGCGGA GGCGGACCTG
CGCGCCATTC TGGCCGATGA ACCGGACGAC GCCCACGCCC TGAACGCCCT GGGGTATACC
CTGGCCGATG CCGGTGAGCG CCTGGAGGAG GCCCGCGAGC TCATCGCCCG TGCGCTGGCA
CAGGAGCCCG ACCATCCGGC GATTCTCGAT AGCAAGGGCT GGGTGCTCTA CCGTCTGGGC
AAGCCGGAGG CTGCGCTCGA CTATCTGGAG CGGGCCTGGG CCCGGCAGCC GGATCCGGAG
ATTGGCGCCC ACCTGGGCGA GGTGCTCTGG GTGCTGGGCC GCCGAGAGGA GGCGCGCGCC
ATCTGGGAGG CCGCCGAGGA ACTGGAAGCC GACCACCCGG TACTGCGGGA GACCCTGGAG
CGGCTGCGGC CATGA
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| Protein sequence | MQKDRLTPWR RLGIGHRLLL SLTALAVLAG CASVAPDSAP TPVEPPVAVV SDLPPWEDDP
KARLLYTMMV AEMARHRGDA DQALAAYLEA MHLTRDTRPA EQAAQLAIIQ GRLDDALAAL
QRWDALDDDN AEVDRLLGLL HLRAGEPDRA YHHLSRYLET LDGEVRQAFQ GLGELMGREA
RADDVLQVLE RLADEYAGHA SAQVALARAA MQLGRLETAL EASRRAAELD PDWQAPRMLE
VQALVNLDRP EAALDVVEAL LAQDAEDRSL RMLHARLLVN MGHRERALEE FEVLMAQRPD
DLEVAYAAAL LATDLRRWDQ AREYWQFIAK RAYQRAEAFY RLGRIAEQEG NREEARAWYE
RVPGEYWTDA QLALARMEMD DGRETQARER LAAVREQRPA ERTRAWTQEA HLLSGQGRAG
EAVALLDDAL EAEPGDHSLL YARALARVET GDLAGAEADL RAILADEPDD AHALNALGYT
LADAGERLEE ARELIARALA QEPDHPAILD SKGWVLYRLG KPEAALDYLE RAWARQPDPE
IGAHLGEVLW VLGRREEARA IWEAAEELEA DHPVLRETLE RLRP
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