Gene Mlg_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0045 
Symbol 
ID4270914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp49079 
End bp49588 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content66% 
IMG OID638124770 
Producthypothetical protein 
Protein accessionYP_740892 
Protein GI114319209 
COG category[S] Function unknown 
COG ID[COG3516] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03358] type VI secretion protein, VC_A0107 family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC AAGGAACGGT CGCGCCCAGA GAGCGCATCA ATATCCGTTA TGTGCCCGCC 
ACCGGAGACC AGGCGTCCGA GGCCGAGCTG CCACTGAAGC TGCTGGTGGT TGGCGACTTC
AAGGGCGGTT CCGAGGAGAC GCCGATCGAG GAGAGAACGG CGGTCTCCGT GGACAAGAAC
AACTTTCACT CCGTGCTCGC CGAGTCGGGC CTGGGCCTGG AGGCCTGCGT GCCCAACCGG
CTGCAGGCCG GTGACGAGGT CAGCGATCTG CCCGTCCGCC TCTCCTTCAA GGCGCTGGAT
GACTTTGCCC CCGACCGGTT GGCACAGCAG GTGCCGGAAC TCCGCAAGCT GGTGGCCCTG
CGTGAGGCCC TCGTGGCCCT GAAAGGGCCG CTGGGCAATA TCCCGGCGTT CCGCAGGCAG
TTGCAGGACC TGCTGGAGAG CGAGTCGGTC CGGGAACGGT TGCTGGAGGA ACTGAAGCGC
GTCACGTCCC CTGAGGACGA CACCGAGTGA
 
Protein sequence
MSDQGTVAPR ERINIRYVPA TGDQASEAEL PLKLLVVGDF KGGSEETPIE ERTAVSVDKN 
NFHSVLAESG LGLEACVPNR LQAGDEVSDL PVRLSFKALD DFAPDRLAQQ VPELRKLVAL
REALVALKGP LGNIPAFRRQ LQDLLESESV RERLLEELKR VTSPEDDTE