Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_1650 |
Symbol | |
ID | 4795407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | - |
Start bp | 1677995 |
End bp | 1679263 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640100335 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_001031078 |
Protein GI | 124486462 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0113989 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTTA TCGTATCTCG TTCTCAAATC TCCGGATGTG TCCATGCACC TCCCTCAAAA AGTCACACAC ACCGGGCATT TCTCCTTGCG TCTCTTGCAA AAGGAGAATC GGTCGTTCTC TCTCCGCTTC TGGGCGAGGA CACTCTGGCT ACTCTCTCCG CGGTCAAAGC GCTTGGAGCG AACGTATGCG AAGGGGATGA TCGAATCACG ATCCAGGGCG GCAATTTACA CGCCCCGCTC CCGAAAGGAA CGGTGATAAA CTGTAAAAAC TCGGGCACCT CCATTCGGAT GCTTGCAGGC ATAGCTTCCC GTCTGGATGG AACGACTGAG TTCACGGGTG ACGCTTCGCT CTGTTCCCGC CCTATGAAGC CTCTGCTTGA CGCCCTGTCA GAACTTGGAG CCGGGGTAAC ATCCGACAAC GGATGTGCTC CGTTCACCAT AACGGGTCCG GTATCGGGCG GCGATGTCCA TATTCGCGGT GACGTGAGTT CTCAATTCAT CTCCGGCCTG CTGATCTCTG CTCCGCTTGG CAAAGCTGAC ACGAGGATCC ACCTGACAAC TCCCCTCACG TCAAAACCAT ACGTGGACAT GACGATTTCT GCTATGAAAA AGCACGGCGT TTCGGTCGAG ACGATCGAAG ATGGATATCT TGTCCGTTCA GGTCAGGTCT ATTCTTCCGA GGATGTTCAG GTTGGCGGCG ACTACTCGTC GGCCGCATTT CTGTTTGCGG CGGCGGCACT CGCCGGGGAG ATCGCCGTTT CCGGACTCGA CCCGGCTGAC CCTCAGGGCG ATCAGGTTGT GATCTCCATC CTTGAAACAT TCGGGGCAGG AGTAGTTCGT GATGGCGAAA ACGTTACGAT TCGAAAAGCA GCTTTGAAGG CTGCAGACAT CGATCTTGCG AACGCTCCGG ATCTGTTTCC CATTATCGCG GTCCTTGCGT CGCAGGCGAA AGGCACCAGC AGATTATACG GCGCCGCTCA TCTCAGATTC AAGGAAAGCG ACCGTATCAT GTCCACGGTC CTTTTCCTCA GATCGATGGG TGCAGATATC AGCGAGACTG AGGATGGATG CATTGTTACG GGACCTGCCA ATCTTTCCGG GGCAAATGTT ACTACATTTG GCGACCACCG TATAATGATG GCATCAGCGG TTGCCGGGCT TATCGCAGAT AGTACTACGA CCGTAGATGA TGCCGGCTGC TGCGCAGTTT CCTATCCGGG TTTTGTGAAA GATATGCAGA AACTCGGTGC GGATATGAGG GAAGAATGA
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Protein sequence | MKLIVSRSQI SGCVHAPPSK SHTHRAFLLA SLAKGESVVL SPLLGEDTLA TLSAVKALGA NVCEGDDRIT IQGGNLHAPL PKGTVINCKN SGTSIRMLAG IASRLDGTTE FTGDASLCSR PMKPLLDALS ELGAGVTSDN GCAPFTITGP VSGGDVHIRG DVSSQFISGL LISAPLGKAD TRIHLTTPLT SKPYVDMTIS AMKKHGVSVE TIEDGYLVRS GQVYSSEDVQ VGGDYSSAAF LFAAAALAGE IAVSGLDPAD PQGDQVVISI LETFGAGVVR DGENVTIRKA ALKAADIDLA NAPDLFPIIA VLASQAKGTS RLYGAAHLRF KESDRIMSTV LFLRSMGADI SETEDGCIVT GPANLSGANV TTFGDHRIMM ASAVAGLIAD STTTVDDAGC CAVSYPGFVK DMQKLGADMR EE
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