Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_1648 |
Symbol | |
ID | 4795697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | - |
Start bp | 1675877 |
End bp | 1676932 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640100333 |
Product | hypothetical protein |
Protein accession | YP_001031076 |
Protein GI | 124486460 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0287] Prephenate dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0329926 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTCTGATA TTAATGGATT CAGGGATGAA CTGGCGTCGA TCGACCGCGA GATCATGGAA CTTGTCGGCC GCAGAAACAA AATAGCTCTG GAGATCGGTG AGAAAAAGGC AGCCGCCAAC AAGGAGATTG TCGTTCCATC CGTCGAAACA AACGTCGTTC AAAGATATGT TGATGCCGGG AAAGTTTCCG GCGTGAGTGC GGAAACGGCT GCACGAATCG CCCGGGCGGT TATCGATGAG TCGGTGGATG TACAGGGTAT GATTCCACGC CGTTCTGTTC CGCAGAAAAT CTTCATTATC GGAGGGAACG GCGGGATGGG CAGATGGCTC TCTGAGTTTT TTTCTTCCAG AGGTCATATC GTAACAATCA ATGACCAGAA ACACAATGGG GCTGTCTATC CAGTTGTGGA TATTTTTTCG GGATGCAGGA ATGCCGATGT CATTATCGTA GCAACGCCGA TAAAAATCTC TGCAGAAATC CTTGAGACCG TCCTATCCGA AAACAAAAAC GCTCTCATTT TTGATCTCAT CTCCGTTAAA ACTCCGGTCA TTCCGGTTCT CTGTAAAGCG TCAGCTTTGG GTGCGAAAGT CTGCTCGGTT CATCCGATGT TTGGGTCCAG TGCCCCTTCG ATAGCCGGCA GAAACATCAT CGTATGTTCA TGCGGCAACG ATGAAGCGGC GGATGAAGCG GCGGATCTTT TCAGCGGAGG GACCATTCTT CGGCTGAATA TCGAAGATCA CGATCCGATC ACTGCCTACG TTCTCGGCCT TTCCCATGCG GTGAATCTTG CTTTCAGCGA AGCACTTGTT AGAAGCGGCT TTTCTTCAGA AACACTCTGT GCCGCGGCCT CGACAACGTT TCAGAGACAG ACGGCCGTAT CCTCTGATGT TTCCCGGGAA AACGGCGAAC TCTATTACTC CATCCAGAAG GAAAATCCAT ATAACGAAGC GGCCGTCCAA AACCTGCTGG ACGCTCTTTT GGACCTTCGG TCATCCAATA AGGACGTATT CATAGAGAAA ATGCATGAGG GTGCTGCCTG GTACCCGAAA AAATAG
|
Protein sequence | MSDINGFRDE LASIDREIME LVGRRNKIAL EIGEKKAAAN KEIVVPSVET NVVQRYVDAG KVSGVSAETA ARIARAVIDE SVDVQGMIPR RSVPQKIFII GGNGGMGRWL SEFFSSRGHI VTINDQKHNG AVYPVVDIFS GCRNADVIIV ATPIKISAEI LETVLSENKN ALIFDLISVK TPVIPVLCKA SALGAKVCSV HPMFGSSAPS IAGRNIIVCS CGNDEAADEA ADLFSGGTIL RLNIEDHDPI TAYVLGLSHA VNLAFSEALV RSGFSSETLC AAASTTFQRQ TAVSSDVSRE NGELYYSIQK ENPYNEAAVQ NLLDALLDLR SSNKDVFIEK MHEGAAWYPK K
|
| |