Gene Mlab_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1648 
Symbol 
ID4795697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1675877 
End bp1676932 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content50% 
IMG OID640100333 
Producthypothetical protein 
Protein accessionYP_001031076 
Protein GI124486460 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0329926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTGATA TTAATGGATT CAGGGATGAA CTGGCGTCGA TCGACCGCGA GATCATGGAA 
CTTGTCGGCC GCAGAAACAA AATAGCTCTG GAGATCGGTG AGAAAAAGGC AGCCGCCAAC
AAGGAGATTG TCGTTCCATC CGTCGAAACA AACGTCGTTC AAAGATATGT TGATGCCGGG
AAAGTTTCCG GCGTGAGTGC GGAAACGGCT GCACGAATCG CCCGGGCGGT TATCGATGAG
TCGGTGGATG TACAGGGTAT GATTCCACGC CGTTCTGTTC CGCAGAAAAT CTTCATTATC
GGAGGGAACG GCGGGATGGG CAGATGGCTC TCTGAGTTTT TTTCTTCCAG AGGTCATATC
GTAACAATCA ATGACCAGAA ACACAATGGG GCTGTCTATC CAGTTGTGGA TATTTTTTCG
GGATGCAGGA ATGCCGATGT CATTATCGTA GCAACGCCGA TAAAAATCTC TGCAGAAATC
CTTGAGACCG TCCTATCCGA AAACAAAAAC GCTCTCATTT TTGATCTCAT CTCCGTTAAA
ACTCCGGTCA TTCCGGTTCT CTGTAAAGCG TCAGCTTTGG GTGCGAAAGT CTGCTCGGTT
CATCCGATGT TTGGGTCCAG TGCCCCTTCG ATAGCCGGCA GAAACATCAT CGTATGTTCA
TGCGGCAACG ATGAAGCGGC GGATGAAGCG GCGGATCTTT TCAGCGGAGG GACCATTCTT
CGGCTGAATA TCGAAGATCA CGATCCGATC ACTGCCTACG TTCTCGGCCT TTCCCATGCG
GTGAATCTTG CTTTCAGCGA AGCACTTGTT AGAAGCGGCT TTTCTTCAGA AACACTCTGT
GCCGCGGCCT CGACAACGTT TCAGAGACAG ACGGCCGTAT CCTCTGATGT TTCCCGGGAA
AACGGCGAAC TCTATTACTC CATCCAGAAG GAAAATCCAT ATAACGAAGC GGCCGTCCAA
AACCTGCTGG ACGCTCTTTT GGACCTTCGG TCATCCAATA AGGACGTATT CATAGAGAAA
ATGCATGAGG GTGCTGCCTG GTACCCGAAA AAATAG
 
Protein sequence
MSDINGFRDE LASIDREIME LVGRRNKIAL EIGEKKAAAN KEIVVPSVET NVVQRYVDAG 
KVSGVSAETA ARIARAVIDE SVDVQGMIPR RSVPQKIFII GGNGGMGRWL SEFFSSRGHI
VTINDQKHNG AVYPVVDIFS GCRNADVIIV ATPIKISAEI LETVLSENKN ALIFDLISVK
TPVIPVLCKA SALGAKVCSV HPMFGSSAPS IAGRNIIVCS CGNDEAADEA ADLFSGGTIL
RLNIEDHDPI TAYVLGLSHA VNLAFSEALV RSGFSSETLC AAASTTFQRQ TAVSSDVSRE
NGELYYSIQK ENPYNEAAVQ NLLDALLDLR SSNKDVFIEK MHEGAAWYPK K