| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1588 |
|---|
| Symbol | |
|---|
| ID | 4794397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 1619244 |
|---|
| End bp | 1620056 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640100274 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001031018 |
|---|
| Protein GI | 124486402 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3503] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000117869 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00161321 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG AACAGAGCAT ATCTCCGGGA TCTCCCCCTT TAGTAAAGAG CGGAAGGTAT
TGGGAGATCG ACGCCGTTCG CGGCCTTGCT CTGTTTGGGA TGCTGTATTT TCATTTTCTC
GCCTGTCTCG TGATGTTTCA CATTCTTCAG GAGACCCGCG AGTTTCTGTA TTATTACAGT
CCAATCGTGA TCGTCTCGGC AGCCTTCGTT TTCATTGCCG GCGTTGCGAT CGTTCTTCGC
TATAACCGGA TGCTTGGAAG GCCTCTGGAT GCATACTATC GCGATATCGC AGTCAAAGCC
CTGGTTCTGT TTTTTATCGC CATGTGTATC ACGGCGCTGA CGTGGCTTGC TTCCGTGGTT
ATCTTTCACG ATGACGTGTT TGTCAAGTTC GGCTTTCTTC ATATGCTGAG CATATCGATG
CTGATCGCGA TTCCTTTGAT CAGGTTTGGC AAATGGAACA TTCTTTTCGG CCTGCTGATC
ATCCTTGTTG GGATTTTCAT CATTCCGTTC ATCCATGATC CCGGCTGGCT CTATCCGCTC
GGCATTCACG GGGCCGACTT TATGGATCAT ACGCCGGATT ATTTCCCGCT CTTTCCATGG
AGCGGATTCA TCCTGTTAGG CATCGGCCTT GGCAATATCT TCTATCCGAA AGGCGTCAGG
GCGTTTTCTA TGTGGCAGCC GAAAATCCCC GGGAAATTCT TTGCCAGACT CGGCCACGGC
AGAACAACGC TGATCGTCTA CCTCGTCCAT ATGCCGATTT TCTTTGTAAT GCTGTGGATT
TTGAGCGTGA CGACCGGCAT CGGGTATGTT TAG
|
|---|
| Protein sequence | MSDEQSISPG SPPLVKSGRY WEIDAVRGLA LFGMLYFHFL ACLVMFHILQ ETREFLYYYS
PIVIVSAAFV FIAGVAIVLR YNRMLGRPLD AYYRDIAVKA LVLFFIAMCI TALTWLASVV
IFHDDVFVKF GFLHMLSISM LIAIPLIRFG KWNILFGLLI ILVGIFIIPF IHDPGWLYPL
GIHGADFMDH TPDYFPLFPW SGFILLGIGL GNIFYPKGVR AFSMWQPKIP GKFFARLGHG
RTTLIVYLVH MPIFFVMLWI LSVTTGIGYV
|
|---|
| |