| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1567 |
|---|
| Symbol | |
|---|
| ID | 4796055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | + |
|---|
| Start bp | 1600031 |
|---|
| End bp | 1601266 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640100254 |
|---|
| Product | putative pseudouridylate synthase |
|---|
| Protein accession | YP_001030998 |
|---|
| Protein GI | 124486382 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1258] Predicted pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR01213] conserved hypothetical protein TIGR01213 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.659369 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0108889 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAAC TCGTCAATGC CATATTAGAG TACGGCGATA TTTGCGATCA CTGCCTTGGA
AGATTGTTCG CAAAAAAATC ATTCGGACTC ACTAACGAAG AACGTGGCCG CTCATTGAGA
ATAGCCCATG CTCTCGCATA TAATATCCCC TACAAACCAT ACGAAAAAGG AACCTGCTGG
GTCTGTAACG ACCTATTCGA TACCATTCCC TACTGGGCAG AAAAAGCAGC GGCGGCAGTA
CAAGGAATCG AACACGACAC ATTCGTCATA GGCACCAGAG TTCCCCCCAT GATGGCGGAA
TCGGAAGAGA TGCTCTGGTC CGACCTTGCG CTCGAAAATC CCGAACCCCT CAAATCCGAG
ATGAACCGCG AAGTCGGAAA GGCAGTATCC GCCCTCACGG GAAAACACGG AAATCCGAAA
AATCCCGAGG TCACCATCGT CCTGAACATC GCCGATGACT GCGTTGAGGT TCAGATCGCA
TCCCTCTACT TCTACGGCAG ATATCTGAAA TATGAACGCG GAATCCCGCA GACGCACTGG
GACTGCCGCG CATGCAAAGG GAAAGGCTGC GAAATATGCA ACTTTACCGG CAAACAATAC
CCCACATCAG TGGAAGAACT CATTGCAGAA GCACCAAAAC GGATTTTTGA AAGTGACTGC
GGGGTCCTTC ACGGAGCGGG AAGAGAAGAC ATCGATGCGG TAATGATCGG AACCGGAAGA
CCCTTTGTTA TGGAGATGCA GAACCCGAAA AAACGCTCAT TTGATTTAAA AGAGCTGGAA
AATGCAATTA ATGCATCTGC GAATCCACGT GTAGGCGTCG TTCTGGAAAG CTGGTCCGAC
AAAAAGACCG TGGAAATGCT TAAATCAAAC AAAGGGCATA AAACATACAG GATTCTAGTC
TCAATAGATG ACCGTATCTC TCTGGAAACC GTGCAAAACG CCGTATCCAA GCTCAAAGGA
GCCTGGATTG ATCAGCGCAC GCCTGAACGG GTCTCCCATC GGCGTGCAGA TCTCGTTCGA
AAGAGACAGG TCATTGACAT AGGAGTTCTT GGTGAAGAGA ACGGACTTTA CCGGCTTGAA
GTGCTTGGTG AAGGCGGTCT TTACATCAAA GAACTCGTAT CAGGAGACGG GGGCAGAACA
ACGCCCAGTC TTGCTGAAAT CCTCGCCGTA CCCGCCAAAG TCGTCGAATT AGACGTGGTG
CAGGTAGACG GATTACCAAA TATTGGAGAT GAGTAA
|
|---|
| Protein sequence | MLELVNAILE YGDICDHCLG RLFAKKSFGL TNEERGRSLR IAHALAYNIP YKPYEKGTCW
VCNDLFDTIP YWAEKAAAAV QGIEHDTFVI GTRVPPMMAE SEEMLWSDLA LENPEPLKSE
MNREVGKAVS ALTGKHGNPK NPEVTIVLNI ADDCVEVQIA SLYFYGRYLK YERGIPQTHW
DCRACKGKGC EICNFTGKQY PTSVEELIAE APKRIFESDC GVLHGAGRED IDAVMIGTGR
PFVMEMQNPK KRSFDLKELE NAINASANPR VGVVLESWSD KKTVEMLKSN KGHKTYRILV
SIDDRISLET VQNAVSKLKG AWIDQRTPER VSHRRADLVR KRQVIDIGVL GEENGLYRLE
VLGEGGLYIK ELVSGDGGRT TPSLAEILAV PAKVVELDVV QVDGLPNIGD E
|
|---|
| |