Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_1556 |
Symbol | |
ID | 4794916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | - |
Start bp | 1589876 |
End bp | 1590613 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640100243 |
Product | tetrahydromethanopterin S-methyltransferase subunit A |
Protein accession | YP_001030987 |
Protein GI | 124486371 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4063] Tetrahydromethanopterin S-methyltransferase, subunit A |
TIGRFAM ID | [TIGR01111] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.345756 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000057533 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTAGACA AGAAATCCCC GGCAGGCGGA TGGCCGATCA TTCAGGGTGA TTACCACACC GGTGATGCAA ACAGCCCTGT TGCTGTCATA ACCATGGGTT CACACCTTGA CGAGACCGCC ATCTGTGTTG CAGGTGCAGC TCTTGCAGGA TCCTGTAAGA CTGAAAACCT CGGTATCGAA AAGATCGTTG CAAACGTCAT TTCAAATCCG AACATCCGTT TCGTTCTGCT TTGCGGTACT GAAGTGAAAG GTCACCTTTC AGGTCAGTCT ATCGAAGCAA TGCACAAAAA TGGTGTTGAA GGCGGAAAGA TCGTTGGTTC TACCGGAGCA ATTCCGTTCC TTGAAAACCT TGGCGATTCC GATATCAAAC GTTTCCAGGA ACAGGTTGAA CTTATCAACA TCATGGAAAC CGAAGATCTC AATGTCATTG CAGCAAAAAT CAACGAGCTC AAGGCACGGG ATCCCGGAGC ATTCGGTGCA GACCCGGTTG TCATCCAGTT ATCCGATGAT GACAGCAGCG GTGGAGCAGG TGCTGAATCC GGCGAAGAAG AACCTTTGAC CGGTGAAATG GCCTTAATTA CCGCCCGCAT CAAAGCGATC CAGATGATGG TCACTGATAT CGGTTACCGT AACAGATTCG CATCCGGTCT CTACGGAGGC AAGATCGAAG GTCTCATGAT CGGTTTGATC GTCTCTCTGG TTATTCTTGG TGCACTTATC GGTGTTCAGG TGATCTAA
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Protein sequence | MVDKKSPAGG WPIIQGDYHT GDANSPVAVI TMGSHLDETA ICVAGAALAG SCKTENLGIE KIVANVISNP NIRFVLLCGT EVKGHLSGQS IEAMHKNGVE GGKIVGSTGA IPFLENLGDS DIKRFQEQVE LINIMETEDL NVIAAKINEL KARDPGAFGA DPVVIQLSDD DSSGGAGAES GEEEPLTGEM ALITARIKAI QMMVTDIGYR NRFASGLYGG KIEGLMIGLI VSLVILGALI GVQVI
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