Gene Mlab_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1548 
Symbol 
ID4796028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1583219 
End bp1584079 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content46% 
IMG OID640100235 
Producthypothetical protein 
Protein accessionYP_001030979 
Protein GI124486363 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.626494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000786067 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTGACG CAATTTGTGT GCATGAATTA TGTAAGGAAT ATCCCGACTT CTCCCTGCAG 
AACGTTTCAT TTTGTCTGCC TAAAGGAAGC ATAATGGGAT TTATCGGGGA AAACGGAGCC
GGAAAAACAA CAACAATAAA AACGATGCTT GGGATCGCCA AAAAAACCAG CGGCTCAGTA
AAACTGTTCG GGCTGGATCT TGCGGATCAC GAAAAGGAGA TCAAGAACCG GATCGGTGTC
GTCTTCGATG AATGCAGTTT TCACGACACG CTCACCGCGC TTGATGTGGC GAAGATCCTT
GGGAAAATCT ATGCGGATTG GGATGATCCA CTCTATATCA AATATCTCAA ACAGTTTGAT
CTCCCGGAAA AGAAAAAGAT CAAAGAGTAC TCCCGGGGCA TGAAAATGAA GCTTGGGATC
GCAGCGGCTC TTTCCCATCA CCCGGATCTG CTGATCCTTG ATGAACCGAC CAGCGGACTC
GATCCGGTCA TCCGTGAAGA GATACTGGAT ATCTTCCTTG AATTTATTCA GGATGAGGAG
CACTCGATCC TTCTTTCCTC GCACATCACA AGCGATCTCG ACAAAATCGC CGATTACCTT
ACCTTTATCC ATGAGGGAAA GATCGTGCTT TCCAAATCCA AAGACGAGAT CCTGGAAGAT
CTGGGTATTC TGAAATGCAG TCTCGAGGAG TTTGGTGCCC TTGACAAAAC ATCATTTATC
ACCTACCGAA AGAATCAGTT TGGCTGTGAG GTGCTGATCA AAGACAAAAT GAACTTCATT
TCACGGCACC CGGATATGAT CGTAGATCCT GTTTCGACGG AATCGGTTAT GGTGTTTTAT
GCAAGGGGGA AAACCGTATG A
 
Protein sequence
MSDAICVHEL CKEYPDFSLQ NVSFCLPKGS IMGFIGENGA GKTTTIKTML GIAKKTSGSV 
KLFGLDLADH EKEIKNRIGV VFDECSFHDT LTALDVAKIL GKIYADWDDP LYIKYLKQFD
LPEKKKIKEY SRGMKMKLGI AAALSHHPDL LILDEPTSGL DPVIREEILD IFLEFIQDEE
HSILLSSHIT SDLDKIADYL TFIHEGKIVL SKSKDEILED LGILKCSLEE FGALDKTSFI
TYRKNQFGCE VLIKDKMNFI SRHPDMIVDP VSTESVMVFY ARGKTV