Gene Mlab_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1422 
Symbol 
ID4796073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1451502 
End bp1452974 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content44% 
IMG OID640100108 
Producthypothetical protein 
Protein accessionYP_001030855 
Protein GI124486239 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.379895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATTC CTTTTATATC CAATATCATG CGTGTTCCTG CAATACAACG TCAGAGTACT 
CTCTATTTAT TATCGACAAT AGGTATCACC CTTTTTGGAT TCATATCGAC CATGCTCTTC
TCCCACCTTC TTGGAAAAGA TCTGATGGGA GTCTACTATC TTTTCCTCGC TTATTACGGC
ATATTCAACA TGATCGGAGA TGGAGGATTT GGACAAGCAG CTCTTAAGCG AATATCTGAA
GGAAAAGAGC AGAATGAATA TCTCACTGCT TATGCCACGC TTCGTGCCCT TCTTATTATT
GTATCCACGC TTCTTCTGTT AGTTCTCAGC CCATTTTTCG TTGATCTTCA GGGATATGAC
CTTATCCCAT GGATCATAGC TGCTCTTGTT GCCTCATTTT TCGGACACAC AATAACATAT
GGTGTCTACG GTCTGGGACA TGTGGGAGTA AATAATGTTG CCGTCGGGAT AAGTGATTTT
TTCCGCATTC TTATTCAGGT CGTTGCAGTC CTTCTTGGAT TTTCCATATA TGGGTTATGT
GGAGGATTCA TCGTCTGCAT CATTATTTCT GGCATTCTCT GTCTGAAATA TTTCACCTTC
AAACCTGCAA AATTCAGTTT TCATCATATC AGTAGTCTTG CAACTTATGG ATTCTGGATT
TTCCTGATTG GGACTGGATC CATCGTTTTT GCCTATGCCG ATACGATTTT CATCGGTTAT
TTTATGACCA ACGGTGATGT CGGCGTGTAC CGGACTGCCT TTCAATTCAC TTCAATATCC
ACCTTTATTT GTGCCGCTAT CGCCGGGACT CTCACCCCGA AAATAAGTCA CTGGAGTGCA
AATAATCATA TGGATAAAAT TGCTCCAGTA ATCACCCGTG GAATAACTTT CTCTCTACTA
TTGGCCATTC CTGTTGCTTT TGGTGGAATC CTTCTTTCAG AACGATTGCT ATATTTCTTC
TACGGGGCTG ATTTCGCCGC TGGTTCTACA GTATGTTCGA TTCTCTTTAT TATGCAGATT
ATCTCAGTGT TCACACTGCT TCTCGGCGTT GCGCTTACCG CATCGGATCA TGCCCGTCAG
GCATTCTATG CCGCCGGAAT CGCTGCTCTC CTCAACATTG CTCTGAATGT AACCCTAATT
CCGATCTTTG GGATTAATGG GGCAGCCGTC TCCACTGTAA TTAGTTTCTT CCTGAATGCT
TTCTTACTGG CTCACTTCCT CAAACGTTAC ATCATCATCC GGATCGAGCT CATCCCAATA
GCCCATATAA TCATCGCGTC TCTCGTCATG GCTCTCTTTG TCTTCATCTA CATACAATTC
GTCCCTCTTG ACAACATCAT CGTCACCCTT GTTCCGGTCT TCATCGGTGC CTTCATCTAC
GTCCTTCTTC TCTTCAAACT AGATCGCGGC ATCCGTGATG AAATTGCCGG CATGGTTACA
ACTTTCGGCC TCCCCTGGCC AAAATGGCTG TAA
 
Protein sequence
MPIPFISNIM RVPAIQRQST LYLLSTIGIT LFGFISTMLF SHLLGKDLMG VYYLFLAYYG 
IFNMIGDGGF GQAALKRISE GKEQNEYLTA YATLRALLII VSTLLLLVLS PFFVDLQGYD
LIPWIIAALV ASFFGHTITY GVYGLGHVGV NNVAVGISDF FRILIQVVAV LLGFSIYGLC
GGFIVCIIIS GILCLKYFTF KPAKFSFHHI SSLATYGFWI FLIGTGSIVF AYADTIFIGY
FMTNGDVGVY RTAFQFTSIS TFICAAIAGT LTPKISHWSA NNHMDKIAPV ITRGITFSLL
LAIPVAFGGI LLSERLLYFF YGADFAAGST VCSILFIMQI ISVFTLLLGV ALTASDHARQ
AFYAAGIAAL LNIALNVTLI PIFGINGAAV STVISFFLNA FLLAHFLKRY IIIRIELIPI
AHIIIASLVM ALFVFIYIQF VPLDNIIVTL VPVFIGAFIY VLLLFKLDRG IRDEIAGMVT
TFGLPWPKWL