| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1144 |
|---|
| Symbol | |
|---|
| ID | 4795429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 1159125 |
|---|
| End bp | 1161899 |
|---|
| Gene Length | 2775 bp |
|---|
| Protein Length | 924 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640099816 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001030580 |
|---|
| Protein GI | 124485964 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATA CCTACCGATA CCACCCGGCC GAGTTTCCCG AACCGCTCGT ACAGGTCAAA
CACATCACCG CCACATTCGA TATAACCGAA GAACGCGTCG GAGTCTCCGC CGAAACCACC
TTCCTCGTCC GTACCGACAA GCTCAGCGAA ATCGTCCTGA ACGCCAGGGA TCTGGAAATA
CAAAGCATCC GGCAGAATAC CCGGCCGGTC CATTACATCT ATGAAAACGA CCTCATCACC
GTAACTCTCC AGCGTCCCTT GTCCAGAGGA GCTGAATTCA AACTCGTCAC CTACACTATC
TGCCATCCCA CTTCTCACAT CCTTGAAGGA ATCTACTTCG ACGTCACCCC GCCGGGTCTG
CCCCGGACCA TGATAACCCA GTGCCAGCAG TGGGGATTCC AGCGGATGGC CCCCTGCCTG
GACGACATGC GGGCCAAATG CACCTGGACC ACGACGATCA TCGCCGATTC CCGGTACACG
AATCTCATTT CAAACGGCAA TGTGATCCGC GAACGGATGC GGTACGACGA AACACGCGAC
ACTATCACCT ACCAGAATAA CGAACCCATG CCGCCCTACC TGTTTTTCCT CGGGGTCGGA
ACATGGGACA CGTTTTCCCG AGACTTCATC TACCCGGACG GCAAAACTGT GCGGCTCGGA
CTCCTCGCCC CAAAGGACTC GGACCCGTCA TCCGCCAAAA ATGCTCTCGG CATCATGGCC
GACTGTATTT TATGGACCTA TCTCTACACC GGCCCGGAAC GCTACGAGTC CATCGATCTG
AGAAACGAGA TCTACCGGCT CTGCAAAGTC CGGGATGCTT TAGCCCGCGA AGCAGAGCCT
GCGGAACTGG AAGAGGCGAT CGATCCGGTC CAGCGGCAAA TCAGCGCTCT CATGAAGCGT
CTCGTCTGCG GGTATCAGTA CCCGTATGAA GTCTACCGGG AGATCGCCAT GCAGAACTCC
GATTTCGGCG GCATGGAAAA CACCGGCAAT ACTACGATCA TCGCAAGCCG GATCATGCCG
GATATGGAGA TAACGGATGC ATCGTATGAG TATCTGATCG GCGTCAAGCA GCACGAGTTC
TATCATAATC TGAACGGATC GAGCGTCACC GGCGACACGC CGTTTTCCAT CTGGCTCAAC
GAGGCCGTGA CGGTAATGAT CGAAGACGAG TATCTTGCTT TCCTCTTTGG AACCGAGTAT
GTCCGGCTTC AGAACATCCT GCAGATGTAC ACCCCAGGGA CAGGCACCTT TTCTCTCGAC
ACCGGCGTTG TCGCGATGCC GATTGAACCG TCAGGCTTCA ACGACCCTAA CGATCTCATC
AGCTCCGTGA CCTATGTCAA AGCTCCGGAG TTTACCCGGA TGATCGAGAC GATGCTTGGA
AAGCGGGCCT TTGCCTGGGC GCTCGATCTG TATCACAAAC GGTTCGCCGG GAAAAACGCC
TCTCCCCGCG ACTGGCTTCA TGCGATGGAG GATGTCGGCC GGACCGACTT TTCCTTCATG
GCGGACAGGT GGCTCAAACA GACCGGCTAC CCTATCGTCT CCGCATCTGC GAAGTATGAC
GCCGAAAACG ATGTCGCCGA GATATTCGTC TCGCAGAAGA TCCCTTCCGG CAAAAATCCC
TGGATTTTTC CATTCACTGG ACGCTTGATC AACGACAAAG GCGAGATCGT TGCCGAGTTC
ATCAAGAAGA TCGACTCTGA AAGGCTCACG TTTCAGGTCC CGTGCACGGG AGCTTTTTCA
TTTGCCGTCT GGAACCTGAA TCATGCCGCC TATCTGCGTA TGGAAACCAC TGCCTCCGAC
GACGAACTCT ATCTCCAGCT TAAGTACGAC ACGGACATCG TTGTCACGTT TTTGACCCAC
TGCACGCTGT TCGAGCGTGA GATGGTGAAA CTCTGCCGCG ATGAGGCCGC CGAGGTTTCG
CCGCGTCTGG TGGACGAGTA CATTGGTTTG CTCTCCAACG CGGCCGTGAT GGAACGCGTG
GGCGCACTTC CTCTTACTCT CTTTGAGTCG GTGAGCGATC CCGAATACAT GTACTCCTAT
ACAAAACTCT ACGAAGCAAA ACGGCGGTTC ATGTCGGCGG TCGCCTCTTC GCATCGGGAT
CGGCTGCATG TCCTTCTTTC GGCCTACTCC TCATCACCTG CGAAGACGAA CTCTCCTGCG
AAGCTTGCCA GGATTTTCAA GACCCGAAGC GTGAAAAATC TCATTTTATC TCTGCTTGCA
ACACTGGATA CGCCTGATAT CCATGCGATG CTGAAGGAAC GATACGAAAA AGCGGTGTGT
GCGACGGACC GGATGGCGGC ACTTTCGTTG TATCTTTCGA GCAGTGCCCA AGACAGGATC
ACGATGCTGG AGGCCGAACT TGCCCGCGCC AAGGATAATC CGATCGCATT CGAAAACTTC
ACAGCAGCCG TGTCGACAAC GAGTTCCCCT GACACTGTTT TGTATCTGAA AACCATCGAG
GCCTCCTCCG CCTTCGACCC TGAGCAGGCC GGTGTGAGCC GTGCCCTGTA TCTGCGGTTT
TCCCAGAACA GAAAGATCTC TATCGAGACG GCGGCAGGAA GAGAGTTTCT GGAAAGCTCC
ATCCTGCGTC TTGCACCCGT GAACGAGTAT GTGACGACCG GAATGCTTTC TGCCTTCTCG
CATGTGAACA GGTATGCGGA CGAGGTGAAG CTGCCTCTTG TTTCGATCCT TGAAAATCTC
CGGGATACAA TCGACGAGAG CAAGGCGCCT TCCGTTCACC GCACGATTCT GCAGATCCTT
GGAAAGATCA GCTGA
|
|---|
| Protein sequence | MADTYRYHPA EFPEPLVQVK HITATFDITE ERVGVSAETT FLVRTDKLSE IVLNARDLEI
QSIRQNTRPV HYIYENDLIT VTLQRPLSRG AEFKLVTYTI CHPTSHILEG IYFDVTPPGL
PRTMITQCQQ WGFQRMAPCL DDMRAKCTWT TTIIADSRYT NLISNGNVIR ERMRYDETRD
TITYQNNEPM PPYLFFLGVG TWDTFSRDFI YPDGKTVRLG LLAPKDSDPS SAKNALGIMA
DCILWTYLYT GPERYESIDL RNEIYRLCKV RDALAREAEP AELEEAIDPV QRQISALMKR
LVCGYQYPYE VYREIAMQNS DFGGMENTGN TTIIASRIMP DMEITDASYE YLIGVKQHEF
YHNLNGSSVT GDTPFSIWLN EAVTVMIEDE YLAFLFGTEY VRLQNILQMY TPGTGTFSLD
TGVVAMPIEP SGFNDPNDLI SSVTYVKAPE FTRMIETMLG KRAFAWALDL YHKRFAGKNA
SPRDWLHAME DVGRTDFSFM ADRWLKQTGY PIVSASAKYD AENDVAEIFV SQKIPSGKNP
WIFPFTGRLI NDKGEIVAEF IKKIDSERLT FQVPCTGAFS FAVWNLNHAA YLRMETTASD
DELYLQLKYD TDIVVTFLTH CTLFEREMVK LCRDEAAEVS PRLVDEYIGL LSNAAVMERV
GALPLTLFES VSDPEYMYSY TKLYEAKRRF MSAVASSHRD RLHVLLSAYS SSPAKTNSPA
KLARIFKTRS VKNLILSLLA TLDTPDIHAM LKERYEKAVC ATDRMAALSL YLSSSAQDRI
TMLEAELARA KDNPIAFENF TAAVSTTSSP DTVLYLKTIE ASSAFDPEQA GVSRALYLRF
SQNRKISIET AAGREFLESS ILRLAPVNEY VTTGMLSAFS HVNRYADEVK LPLVSILENL
RDTIDESKAP SVHRTILQIL GKIS
|
|---|
| |