Gene Mlab_0957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0957 
Symbol 
ID4794866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp950765 
End bp951196 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content56% 
IMG OID640099621 
Productmembrane bound hydrogenase subunit mbhJ 
Protein accessionYP_001030394 
Protein GI124485778 
COG category[C] Energy production and conversion 
COG ID[COG3260] Ni,Fe-hydrogenase III small subunit 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0013552 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.515096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCA CACCATCCTT AAACAAATCC CTCTGGGTCT TCCACTTCAA TGCGGGTTCG 
TGCAACGGCT GCGATATCGA GATCGTGGCG ACCCTGACCC CCAGATACGA TCCTGAACGT
TTCGGCGTAA AACTCGTGGG GTCTCCCCGC CATGCTGACG TTTTACTCGT AACGGGCCCC
GTCACCAATC AGATGGCCGA CAGACTCCGC CGGGTTTATG CACAGATGGC AGGACCCAAA
GTGGTGATGG TCGTTGGAAC ATGCGGCCAG TCGGGCGGTG TGTTCTCGAC ATCATACAAT
CTGGCAGGCC CGGTCGATCA GATCATCCCG GTGGACGTAT ATGTCCCGGG ATGTGCCCCG
AGACCCGAGG CAATTATTAA CGGCGTGGTT ACGGCGATCG CGAAGCTCGA ACGACTCGAA
GGAGGAAAAT AA
 
Protein sequence
MKLTPSLNKS LWVFHFNAGS CNGCDIEIVA TLTPRYDPER FGVKLVGSPR HADVLLVTGP 
VTNQMADRLR RVYAQMAGPK VVMVVGTCGQ SGGVFSTSYN LAGPVDQIIP VDVYVPGCAP
RPEAIINGVV TAIAKLERLE GGK