Gene Mlab_0937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0937 
Symbol 
ID4795623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp934754 
End bp935431 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content54% 
IMG OID640099602 
Product2, 5-diamino-6-(5-phosphoribosylamino)pyrimidin-4(3H)-one reductase 
Protein accessionYP_001030375 
Protein GI124485759 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID[TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0807982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCGT ATGTGATAAT CAACGCAGCC ATGAGCGCTG ACGGGAAACT CGCCACCCGG 
GAAAGGAAAC AGACCAAAAT ATCCGGTCAT GATGACTTTT TGCGGGTGGA CCGTCTTCGT
GCCGATTCGG ACGCGATAAT GGTGGGTATA GGAACCGTCC TCTCCGACGA TCCCTCTCTT
CGCCTCAAAA GCGAGGAGCA TGCCGGCATG CGAAAAGCAA ACGGCAAGGA TCCGCATCCG
ATGCGGGTCG TTATCGACAG CACGGCAAAA ATGCCCGCTG ACGGCGATAT GTTCAAAAAA
GGACTTGGCC GCGTGGTGAT TTTCGTCTCT GAAAAGGCGC AAAAGGAAAA GTGCGATGCT
CTGAGAGAAA AAGCGACCGT GATCTCTGCC GGCCGCGACT CTGTCGATCT GGAAATCGTT
TTGGACGAAC TCTCAAAACT CGGCGTCGAA AAACTCATGG TCGAGGGGGG GTCGACCCTT
CTCTGGTCCT TTATGAGCAG CGGTCTCTTT GATGAAATAC GCATATACAT CGGAGCGCTG
ATCATCGGCG GGAAAGATGC TCCGACCTTT GCCGACGGAC AGGGCTTCAC GGATCCTGAC
GATTTCACCC GTCTCACGCT CAAAGATATC GAGCGGATCG ATGACGGCGT CCTGCTGACC
TGGGTAAAAA AGGCGTGA
 
Protein sequence
MRPYVIINAA MSADGKLATR ERKQTKISGH DDFLRVDRLR ADSDAIMVGI GTVLSDDPSL 
RLKSEEHAGM RKANGKDPHP MRVVIDSTAK MPADGDMFKK GLGRVVIFVS EKAQKEKCDA
LREKATVISA GRDSVDLEIV LDELSKLGVE KLMVEGGSTL LWSFMSSGLF DEIRIYIGAL
IIGGKDAPTF ADGQGFTDPD DFTRLTLKDI ERIDDGVLLT WVKKA