Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_0850 |
Symbol | |
ID | 4795106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | - |
Start bp | 834589 |
End bp | 837093 |
Gene Length | 2505 bp |
Protein Length | 834 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640099513 |
Product | hypothetical protein |
Protein accession | YP_001030288 |
Protein GI | 124485672 |
COG category | [R] General function prediction only |
COG ID | [COG1203] Predicted helicases |
TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 [TIGR01596] CRISPR-associated endonuclease Cas3-HD |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGATA AAGTGATACT ACTTGGAAAA ATTATGTACC TTGCCCATAT TAATCATGAA ACAAAGCTGG AACAAACATT AGCTGAACAC AGCACAACGG TCTCCGATCT CTGTAAAGGA TATGGAGAAG GAATCGGCTG TCCAAATCTC GCAGCGTTAT GTGGTTTACT TCATGATACG GGAAAGGCAA AACAGGAGTT TCAGGAATAT CTGAAAATCA ATGATCCGGA GATCAGAAAA CGCTATCGGG GAAAAATAAA TCACTCAACC GCCGGGGCAA AATATATTTT TGAAAAATAT GATAAATCAA CCGATAATTT TGAAAGATTC ACTGCACAAC TCATAGCACT GGGTATTTGT TCCCACCATG GCGGCTTGAT CGATTGCATT GATCTGGAAG GACAGGATCT ATTTTTCAAG AGGATTAACC CTGAAAAAGA AATCTATTTT GAAGAAAGCA TACACAACTT TGAAAATGAC TGCGTATCCC AAGATGAGTT GGAAACCCTG TTTCTCAAAG CGGTAGATGA AGTCAAAACC TTCAATGAAA AAAACAGATC CAGATTAGGG ATATCCGGAG ATGAAATCAC ATTTACCAGG GGAATGCTGG CCCGGTATCT TCTAAGCTGC GTCATAGATG CAGACCGTTT CGATTCATTT TGTTTTGAAG ATAACATCGT CACTAAAGAT ACACCGAAAA TCGCTGTGGA GAAATGGGAA AAACTTGCAG AAAATCTGGA TGAATTCCTG GATCAAAAAC CCATAATATA CGATATTGAT GAATTAAGAA AAGAAATCTC GCTTTCCTGT AAGGCATTCG GGAAAAAAAC CAGCGGTATC TACCGACTGA ATGTACCAAC CGGGGGAGGA AAAACTCTCT CCAGTCTGCG TTATGCTTTG GCTCATGCCG CAGAATGGAA CAAAGAAAGG ATATTCTACG TAATTCCCTT TACTACGATC ATTGATCAGA ATGCTAAGGT TATCCGCGAA GCTCTCCGTG AAGATGATTT GATTCTGGAA CATCATTCGA ATCTGGTCTA TGAAGATCCT CTTGATGAAA ACGATGAAAG TATAACCGGC GCTGATGAAG GACGAAACTA TCGTCTGCTT ACCGAGAGAT GGGATTCCCC AATCATTCTT ACAACAACGG TCCAGATGCT CAATACCTTG TTTCTCGGAA AAGCTGGTTC AATCAGGAGG ATGCACAATC TCGCAAACAG TATTATAATT TTTGATGAAG TCCAGATGAT TCCGGTAAAA TGTCTTCGCA TGTTTAATAC AGCTCTGAAT TTCCTCTCAG AAATATGCGG AACTACGATC ATTCTCTGCA CCGCAACACA GCCGAAACTC GATAAAGTCA ATCCCCCGAT ACGCCTGTCG GCTCCTGCCG ATATGGTATC AGTCGATTTC GGCAAGTTTC GGAGAACCAA TGTCTGCGAT GAACGTTTGC AGAATGGATA CTCTGCCCCT GAACTTGCGG AATTTGTGGA AGATAAGCTA GAGAATAATG AGAAGATTCT GGTCATTCTC AATACGAAAA CTGCAGTGAA AAATCTCTAT GCACATTTAT CTGCGAAAAA ACTGACTGAT TTCACTACCT ACAAAGATCT CTCTCTCTAT TATTTAAGCA CTAATTTATG CCCGGCACAT CGTCGGAACC GCCTGGAGAG GATAAAAGAC GATCTTAAGA TAAAGAATCA CCGGATGATC TGCGTAAGCA CTCAGTTGAT AGAAGCCGGA GTGGACATCT CCTTTGATTG CGTCATCCGT TCCGCTGCCG GAATCGATAG TATTGCCCAG GCGGCAGGAA GATGCAATCG TAATGGCGAT GTCCAATGTC GGGATGTATT CATCGTAAAC AGTTCTGATG AAAAACTCTC AGGACTCAAA GACATTGACC TCGGGAAAAA AAGCGCAGAG CATGTTCTGA GTGATTTTGC CAAAAATCCT GCGGGATTCG ATAATGATAT CCTATCCCAG AAGATGATCG ATACCTATTA TCAAAAGTAT TTTACCTCGC GGGATGGGGA AATGGGATAT CCAATTACCA AAGAGATGAT AAGCAAAAAA CAAATGGATC TTCCGCTTGG TCGATCAATA TTTGAACTTC TATCAGTAAA CGAGAAAAGC ATTCAGGCAT ACAATACAGA TCAGCACCTG CAGACCCGTC AGTCCCCCTA TTATCTTTGT CAGGCTTTTT CTACTGCCGG AAAATTTTTT GAGGTGATTG ATCAGAACAC AACAACCGTA ATTGTGCCCT ATGATGAAGG TAGCGATATC ATCAGGGAAC TTGGGAGTAA AGCATCATAT ACGGAAAAAC TCCGACTTTT AAAGAAAGCT CAGCAATATT CAGTAAACCT TTATGGTGAT TTGGAGCAAT TACTCACTAA GGAAGATATA TCGCCTATTG GGGATACCGG ATCCTACACT CTCAACACAT CGTCGATTTC CTATGATGAA GAGTACGGCG TGATCTCCTC AAGTGATGCA GAATTAATTT TTTAA
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Protein sequence | MQDKVILLGK IMYLAHINHE TKLEQTLAEH STTVSDLCKG YGEGIGCPNL AALCGLLHDT GKAKQEFQEY LKINDPEIRK RYRGKINHST AGAKYIFEKY DKSTDNFERF TAQLIALGIC SHHGGLIDCI DLEGQDLFFK RINPEKEIYF EESIHNFEND CVSQDELETL FLKAVDEVKT FNEKNRSRLG ISGDEITFTR GMLARYLLSC VIDADRFDSF CFEDNIVTKD TPKIAVEKWE KLAENLDEFL DQKPIIYDID ELRKEISLSC KAFGKKTSGI YRLNVPTGGG KTLSSLRYAL AHAAEWNKER IFYVIPFTTI IDQNAKVIRE ALREDDLILE HHSNLVYEDP LDENDESITG ADEGRNYRLL TERWDSPIIL TTTVQMLNTL FLGKAGSIRR MHNLANSIII FDEVQMIPVK CLRMFNTALN FLSEICGTTI ILCTATQPKL DKVNPPIRLS APADMVSVDF GKFRRTNVCD ERLQNGYSAP ELAEFVEDKL ENNEKILVIL NTKTAVKNLY AHLSAKKLTD FTTYKDLSLY YLSTNLCPAH RRNRLERIKD DLKIKNHRMI CVSTQLIEAG VDISFDCVIR SAAGIDSIAQ AAGRCNRNGD VQCRDVFIVN SSDEKLSGLK DIDLGKKSAE HVLSDFAKNP AGFDNDILSQ KMIDTYYQKY FTSRDGEMGY PITKEMISKK QMDLPLGRSI FELLSVNEKS IQAYNTDQHL QTRQSPYYLC QAFSTAGKFF EVIDQNTTTV IVPYDEGSDI IRELGSKASY TEKLRLLKKA QQYSVNLYGD LEQLLTKEDI SPIGDTGSYT LNTSSISYDE EYGVISSSDA ELIF
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