Gene Mlab_0850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0850 
Symbol 
ID4795106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp834589 
End bp837093 
Gene Length2505 bp 
Protein Length834 aa 
Translation table11 
GC content41% 
IMG OID640099513 
Producthypothetical protein 
Protein accessionYP_001030288 
Protein GI124485672 
COG category[R] General function prediction only 
COG ID[COG1203] Predicted helicases 
TIGRFAM ID[TIGR01587] CRISPR-associated helicase Cas3
[TIGR01596] CRISPR-associated endonuclease Cas3-HD 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATA AAGTGATACT ACTTGGAAAA ATTATGTACC TTGCCCATAT TAATCATGAA 
ACAAAGCTGG AACAAACATT AGCTGAACAC AGCACAACGG TCTCCGATCT CTGTAAAGGA
TATGGAGAAG GAATCGGCTG TCCAAATCTC GCAGCGTTAT GTGGTTTACT TCATGATACG
GGAAAGGCAA AACAGGAGTT TCAGGAATAT CTGAAAATCA ATGATCCGGA GATCAGAAAA
CGCTATCGGG GAAAAATAAA TCACTCAACC GCCGGGGCAA AATATATTTT TGAAAAATAT
GATAAATCAA CCGATAATTT TGAAAGATTC ACTGCACAAC TCATAGCACT GGGTATTTGT
TCCCACCATG GCGGCTTGAT CGATTGCATT GATCTGGAAG GACAGGATCT ATTTTTCAAG
AGGATTAACC CTGAAAAAGA AATCTATTTT GAAGAAAGCA TACACAACTT TGAAAATGAC
TGCGTATCCC AAGATGAGTT GGAAACCCTG TTTCTCAAAG CGGTAGATGA AGTCAAAACC
TTCAATGAAA AAAACAGATC CAGATTAGGG ATATCCGGAG ATGAAATCAC ATTTACCAGG
GGAATGCTGG CCCGGTATCT TCTAAGCTGC GTCATAGATG CAGACCGTTT CGATTCATTT
TGTTTTGAAG ATAACATCGT CACTAAAGAT ACACCGAAAA TCGCTGTGGA GAAATGGGAA
AAACTTGCAG AAAATCTGGA TGAATTCCTG GATCAAAAAC CCATAATATA CGATATTGAT
GAATTAAGAA AAGAAATCTC GCTTTCCTGT AAGGCATTCG GGAAAAAAAC CAGCGGTATC
TACCGACTGA ATGTACCAAC CGGGGGAGGA AAAACTCTCT CCAGTCTGCG TTATGCTTTG
GCTCATGCCG CAGAATGGAA CAAAGAAAGG ATATTCTACG TAATTCCCTT TACTACGATC
ATTGATCAGA ATGCTAAGGT TATCCGCGAA GCTCTCCGTG AAGATGATTT GATTCTGGAA
CATCATTCGA ATCTGGTCTA TGAAGATCCT CTTGATGAAA ACGATGAAAG TATAACCGGC
GCTGATGAAG GACGAAACTA TCGTCTGCTT ACCGAGAGAT GGGATTCCCC AATCATTCTT
ACAACAACGG TCCAGATGCT CAATACCTTG TTTCTCGGAA AAGCTGGTTC AATCAGGAGG
ATGCACAATC TCGCAAACAG TATTATAATT TTTGATGAAG TCCAGATGAT TCCGGTAAAA
TGTCTTCGCA TGTTTAATAC AGCTCTGAAT TTCCTCTCAG AAATATGCGG AACTACGATC
ATTCTCTGCA CCGCAACACA GCCGAAACTC GATAAAGTCA ATCCCCCGAT ACGCCTGTCG
GCTCCTGCCG ATATGGTATC AGTCGATTTC GGCAAGTTTC GGAGAACCAA TGTCTGCGAT
GAACGTTTGC AGAATGGATA CTCTGCCCCT GAACTTGCGG AATTTGTGGA AGATAAGCTA
GAGAATAATG AGAAGATTCT GGTCATTCTC AATACGAAAA CTGCAGTGAA AAATCTCTAT
GCACATTTAT CTGCGAAAAA ACTGACTGAT TTCACTACCT ACAAAGATCT CTCTCTCTAT
TATTTAAGCA CTAATTTATG CCCGGCACAT CGTCGGAACC GCCTGGAGAG GATAAAAGAC
GATCTTAAGA TAAAGAATCA CCGGATGATC TGCGTAAGCA CTCAGTTGAT AGAAGCCGGA
GTGGACATCT CCTTTGATTG CGTCATCCGT TCCGCTGCCG GAATCGATAG TATTGCCCAG
GCGGCAGGAA GATGCAATCG TAATGGCGAT GTCCAATGTC GGGATGTATT CATCGTAAAC
AGTTCTGATG AAAAACTCTC AGGACTCAAA GACATTGACC TCGGGAAAAA AAGCGCAGAG
CATGTTCTGA GTGATTTTGC CAAAAATCCT GCGGGATTCG ATAATGATAT CCTATCCCAG
AAGATGATCG ATACCTATTA TCAAAAGTAT TTTACCTCGC GGGATGGGGA AATGGGATAT
CCAATTACCA AAGAGATGAT AAGCAAAAAA CAAATGGATC TTCCGCTTGG TCGATCAATA
TTTGAACTTC TATCAGTAAA CGAGAAAAGC ATTCAGGCAT ACAATACAGA TCAGCACCTG
CAGACCCGTC AGTCCCCCTA TTATCTTTGT CAGGCTTTTT CTACTGCCGG AAAATTTTTT
GAGGTGATTG ATCAGAACAC AACAACCGTA ATTGTGCCCT ATGATGAAGG TAGCGATATC
ATCAGGGAAC TTGGGAGTAA AGCATCATAT ACGGAAAAAC TCCGACTTTT AAAGAAAGCT
CAGCAATATT CAGTAAACCT TTATGGTGAT TTGGAGCAAT TACTCACTAA GGAAGATATA
TCGCCTATTG GGGATACCGG ATCCTACACT CTCAACACAT CGTCGATTTC CTATGATGAA
GAGTACGGCG TGATCTCCTC AAGTGATGCA GAATTAATTT TTTAA
 
Protein sequence
MQDKVILLGK IMYLAHINHE TKLEQTLAEH STTVSDLCKG YGEGIGCPNL AALCGLLHDT 
GKAKQEFQEY LKINDPEIRK RYRGKINHST AGAKYIFEKY DKSTDNFERF TAQLIALGIC
SHHGGLIDCI DLEGQDLFFK RINPEKEIYF EESIHNFEND CVSQDELETL FLKAVDEVKT
FNEKNRSRLG ISGDEITFTR GMLARYLLSC VIDADRFDSF CFEDNIVTKD TPKIAVEKWE
KLAENLDEFL DQKPIIYDID ELRKEISLSC KAFGKKTSGI YRLNVPTGGG KTLSSLRYAL
AHAAEWNKER IFYVIPFTTI IDQNAKVIRE ALREDDLILE HHSNLVYEDP LDENDESITG
ADEGRNYRLL TERWDSPIIL TTTVQMLNTL FLGKAGSIRR MHNLANSIII FDEVQMIPVK
CLRMFNTALN FLSEICGTTI ILCTATQPKL DKVNPPIRLS APADMVSVDF GKFRRTNVCD
ERLQNGYSAP ELAEFVEDKL ENNEKILVIL NTKTAVKNLY AHLSAKKLTD FTTYKDLSLY
YLSTNLCPAH RRNRLERIKD DLKIKNHRMI CVSTQLIEAG VDISFDCVIR SAAGIDSIAQ
AAGRCNRNGD VQCRDVFIVN SSDEKLSGLK DIDLGKKSAE HVLSDFAKNP AGFDNDILSQ
KMIDTYYQKY FTSRDGEMGY PITKEMISKK QMDLPLGRSI FELLSVNEKS IQAYNTDQHL
QTRQSPYYLC QAFSTAGKFF EVIDQNTTTV IVPYDEGSDI IRELGSKASY TEKLRLLKKA
QQYSVNLYGD LEQLLTKEDI SPIGDTGSYT LNTSSISYDE EYGVISSSDA ELIF