| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0578 |
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| Symbol | |
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| ID | 4794912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanocorpusculum labreanum Z |
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| Kingdom | Archaea |
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| Replicon accession | NC_008942 |
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| Strand | + |
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| Start bp | 547675 |
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| End bp | 549504 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640099236 |
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| Product | glutamyl-tRNA(Gln) amidotransferase subunit E |
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| Protein accession | YP_001030019 |
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| Protein GI | 124485403 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2511] Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain) |
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| TIGRFAM ID | [TIGR00134] glutamyl-tRNA(Gln) amidotransferase, subunit E |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00145771 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000600934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGATTATG AAGCGATTGG TCTGAAGGCC GGCCTGGAGA TCCACCAGCA GCTCAACACC
AAAGAAAAAC TCTTCTGTCA CTCCCCGACG GTTGTCTGCG ACTCAGCCGA ACACACCGGC
GAGGTAAGCA GATATCTCAG GATCGCGACC TCCGAGATGG GCGACGTGGA TCGTGCGGCA
AAAGAAGAGC TGATGAATCA GCGTCTTTTC ACGTATTACA CATACGATAC GACAGGTCTT
GTCGAGATCG ACGAAGAGCC GCCGGCCCCC CTCAACCCGG ATGCACTCGA TGTTGTCTTA
ACGATCGCCA AGATGTTCAA CATGACCCCT CTTCCGGAGA TCCACACGAT GCGCAAGATG
ATCGTCGACG GTTCGGCAAC CAGCGGTTTC CAGAGAACCG CCCTGGTCGC GCTGAACGGA
GCGATCGAGC ATGCATGCAG GGTCGAGACG GTCGCAGTAG AAGAGGAGGC ATGTCAGCGT
GTCGAAGACA CGATCTTCTC CGTCGATAGA CTTGGAATTC CTCTGATTGA GATCACCACA
TCTCCATGCA TGAAAACTCC CGAGGAGGTC CATGATATTG CCCAGTATAT CGGCATGACG
CTTCGGTCGA CCGGCCGGGT CAAACGCGGG CTTGGCACGA TCCGTCAGGA TGTCAACGTC
TCGATCAGAG ACGGCGCCCG GGTTGAGATT AAAGGTGTTC AGGAGCTTGA TCTCATCGCA
GAGGTCGTCC GCCGCGAGGT CCAGAGACAG CTCTCCCTTA TTGCCATCCG GGATGAACTG
CTGGCAAGAA ATGCCATGGT GAACGGAGAA GTGTATGATG TCACCTCCGT CTTTGCCAAG
ACCCAGTCCC AGGTCCTGAA AAAAGCCCGC GTGATCCTTG GAACCGTTCT TCACGGATTC
AACGGTCTTG TCGGTCTTGA GATCCAGACG GGCCGCCGTC TGGGGTCGGA GATGTCCGAT
TACGCAAAGA AATGCGGTGT CGGCGGACTC TTCCACACCG ACGAGCTGCC TGCCTACGGT
GTTACCGAAG AGGAGGTCTT TGTCCTGAAA GAAACACTCG GCGCAGGACC GAATGATGCC
GTCGTTATCG TCGCCGCCAC GGAACAGAAA TGCCGCTGCG CCATGCAGAT GATCATTCGC
CGTGCGAAGA TGGCGTTTGA AGGTGTTCCC GAAGAGACCA GAAAGATGCT TGAGGGCGGT
TCGACCGCGT ACATGCGTCC GCTTCCGGGT GCTGCACGTA TGTATCCGGA GACCGATATT
CTGCCGGTCC CGGTCACGAG AGAGTATTGG GAGAGTATCG CGACCCCAGA ACTTTTGTCG
GTGAAAGCGG AGCGTTTCGT CAGCGAGTAC GGCCTTGATG CCGGCATGGC CAGACAGATG
GCTTTCTCTG AAAAACTTCC GCTCTTCGAG CGCGCAGTGT CTGAAGGAAT CCGGCCGGTG
TTTGCGGCAA GAACGATCCT TGCTTCGCTC AAGGAGTTGT CGCGGGCAGG AATCTCTCCC
GACGCTTTAT CCGATGACTC GATTATTTCG GTGATGAAGA CCGTTGAAGC AGGAAATGCG
GCAAAAGAAG CCGTATTGGA TATTTTAACG GCATGCGCCA AGGGAATGTC CGTCTCCGAT
GCCGTCAGCC GTGTTGCCCC GGCATTCTCC CGCGAAGAAC TTCAGGATCT GGTGCACGGT
ATCGTGAATG ATCGTATGGA GTTCATTCGT ACCCGCGGGA AGGCCGCTCT CGGCCCCGTT
ATGGGGGTAG TTATGAAGGA AGTACGCGGA CGGATCGATG GAAAAGTAGT TTCCGAAGTA
CTGGATGAGG AACTCGGCCG TATCCTCTGA
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| Protein sequence | MDYEAIGLKA GLEIHQQLNT KEKLFCHSPT VVCDSAEHTG EVSRYLRIAT SEMGDVDRAA
KEELMNQRLF TYYTYDTTGL VEIDEEPPAP LNPDALDVVL TIAKMFNMTP LPEIHTMRKM
IVDGSATSGF QRTALVALNG AIEHACRVET VAVEEEACQR VEDTIFSVDR LGIPLIEITT
SPCMKTPEEV HDIAQYIGMT LRSTGRVKRG LGTIRQDVNV SIRDGARVEI KGVQELDLIA
EVVRREVQRQ LSLIAIRDEL LARNAMVNGE VYDVTSVFAK TQSQVLKKAR VILGTVLHGF
NGLVGLEIQT GRRLGSEMSD YAKKCGVGGL FHTDELPAYG VTEEEVFVLK ETLGAGPNDA
VVIVAATEQK CRCAMQMIIR RAKMAFEGVP EETRKMLEGG STAYMRPLPG AARMYPETDI
LPVPVTREYW ESIATPELLS VKAERFVSEY GLDAGMARQM AFSEKLPLFE RAVSEGIRPV
FAARTILASL KELSRAGISP DALSDDSIIS VMKTVEAGNA AKEAVLDILT ACAKGMSVSD
AVSRVAPAFS REELQDLVHG IVNDRMEFIR TRGKAALGPV MGVVMKEVRG RIDGKVVSEV
LDEELGRIL
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