| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0410 |
|---|
| Symbol | |
|---|
| ID | 4794508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | + |
|---|
| Start bp | 387129 |
|---|
| End bp | 388547 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640099063 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001029853 |
|---|
| Protein GI | 124485237 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0165126 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.000394368 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACT CTCCATTTCT TGCTCCCGTG CCGTTTTACT GGTGTGACAA ATGTCATGCC
CCGGTGATGG GAAAACTCTG CTCCTGCGGG GAAAAGGCCC GTCCCGTCTC CGTGACTCCG
CCGGGAGATG TTCGTCCGGC TTTTCAGCGG GACAGAGATC TAGTGAACCG CCTCTTCGAA
GAACAGTTCG GCGTTCCGTT GATCCCTGAT GGATATCTCG CCCTTCTCAA CAAAGTCCCC
GATGAGGACC GGATGGAAGA GATCATCATC GGCGGTGCGG TGGTCTGCGC TATTCGATAT
ATTCCGGCAG AGTCCCGATG GGAAGTTCTG CCTAGAGAAG CAGCGGCGGC CCTAGTCGTC
CCGACCAAAC GATTCATTCG AGTCACGGAC GATGCCGCAG GATATATTCG GGACGGAAGC
AGCGTTCTTA TGCCCGGCGT TACCTTTGTA TCGCCCGATA TCGAAGTCGG CGACAGTGTG
TTCGTTCTTT CCGAGTCTGG GGACTGCGTG GCGGTCGGCA GAGCCAAGAT GTCATATCGG
GAAACGGTGG GTGCTACCCG GGGTCAGCTG GTCAGAACCC GCCGGACTCA AAAACCCATA
GTGGACGCTG CCCCTTCAAC CTGGGAAGAT GCGATCATGG CAAACAACAA TATCCTTGAT
CTCTATGAAA GAAAATCGAT TGAGTTCATC CATGATGTCA TCGCCAAAAA CCCGGGAATC
CAGCCGACCG TATCCTACTC CGGGGGGAAA GACAGTCTGG TAACACTTCT CATCACGCTC
AAGGCAGGGC TTCGTCTGCC GCTGATATTT GCGGACACGG GCCTTGAATT TCCGGAAACA
ATTGAAAATG TCCAGAAAGT CTCCGAACTG TTTGACCTCC CGCTGATTAT CGAGTCGGGA
AATTCCGGGT TCTGGGAAGG ATTTGAACTG CAGGGGCCGC CGGCGGTCGA TTTCAGGTGG
TGCTGCAAAG CATGCAAACT TACGCCGGTC AAGACCCTCA TTGAAAATAA ATGGGGCGAG
GCGATCTCTT TTATCGGTCA GCGAAAGTTC GAGTCTGCCA AACGCATGCA GAGTCCGCGG
GTCTGGAGAA ACCGAAACGT CCCCTGCCAG ATTTCCGCAG CCCCCATCCA GCATTGGACA
GCTATGCACG ACTGGCTCTA TCTTTTCCGG GAAAAAGCTC CTTATAATCC CCTCTATGAA
CTGGGTCTCG ACCGGATCGG CTGCTTTATG TGTCCGTCCT CCGACATAGC CTGCATGAAG
GATATCGAGG CGCGGTATCC GGAATTGTGG GCCGACTGGG AACGGAAACT GAAGGCTTGG
GGAGATGCGA ACGGTAAATC TCCCGAATGG GCGGCGAAAG GTTTATGGAG AATCCGGGAA
ACAAATGAAG AAGATAGTGA TATAGATGGG CACTTCTGA
|
|---|
| Protein sequence | MKNSPFLAPV PFYWCDKCHA PVMGKLCSCG EKARPVSVTP PGDVRPAFQR DRDLVNRLFE
EQFGVPLIPD GYLALLNKVP DEDRMEEIII GGAVVCAIRY IPAESRWEVL PREAAAALVV
PTKRFIRVTD DAAGYIRDGS SVLMPGVTFV SPDIEVGDSV FVLSESGDCV AVGRAKMSYR
ETVGATRGQL VRTRRTQKPI VDAAPSTWED AIMANNNILD LYERKSIEFI HDVIAKNPGI
QPTVSYSGGK DSLVTLLITL KAGLRLPLIF ADTGLEFPET IENVQKVSEL FDLPLIIESG
NSGFWEGFEL QGPPAVDFRW CCKACKLTPV KTLIENKWGE AISFIGQRKF ESAKRMQSPR
VWRNRNVPCQ ISAAPIQHWT AMHDWLYLFR EKAPYNPLYE LGLDRIGCFM CPSSDIACMK
DIEARYPELW ADWERKLKAW GDANGKSPEW AAKGLWRIRE TNEEDSDIDG HF
|
|---|
| |