Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_0346 |
Symbol | |
ID | 4795067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | - |
Start bp | 327087 |
End bp | 327947 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640098995 |
Product | hypothetical protein |
Protein accession | YP_001029789 |
Protein GI | 124485173 |
COG category | [S] Function unknown |
COG ID | [COG4022] Uncharacterized protein conserved in archaea |
TIGRFAM ID | [TIGR03275] putative methanogenesis marker protein 8 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000781127 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGACG AACATATTAT CGAGGCGATC GGAATGACGC GTATCGTCAT CAGGAACGGA AAAGTTGTGG AGGTTGGAGA GCCGGCAGTC GATTTCTGTC CTCTTGCAAA ACGGTTTGCC ACACCGGTCG ACCCGATCAC AAAAGAGTCA GTGCAAAAGA ACATCGAGTC GCGAATCAAA ACCTTCGGGA TGTGTACAAA AGAACGGCAG GTTCTTGACC AGGAAACCTT CGTCCTCTTC GGCGCATCCG AACTGATGAG CACGGGTCTG AGAACAAAGA CCCTTGACGC AGCGGTCATC TGCTCGGACG GCGCAGGAAC GGTGATTGTT CGAACACCCG ATCTTGTTCA GGGACTCGGC GGAAGGATGT CCGGTCTTGT TTCAACGACT CCCCATCCAG AAGTAATCAG AAAAATAGAA GAGTCAGGCG GCATTGTTAT CGACAAAGAG ACCGCAAAAC TCGACGTCCT TGCAGGACTT ACCCGGGCAA AAGCCGAAGG ATGGACGAAA ACGGCAGTGA CCGTTGCGGG ATTCCAGCAT GAACTTGCAG AAGAAATTCG TGCAGAATAT CCGGAAGCAC TGATAATCGC GGTTCACACA TCAGGGGTTG CAAGCGCCGA AAATGCAGAG AGACTCGTCG CCGCCTCTGA CCTTGTCTTT GCCTGTGCCT CGAAGTATGT TCGTGCCGCC GTGTCCAAAG CATTGGTACA GGGAGGCGTT GGCGTGCCGG TGTATGCTAT GACTCGAGCA GGAAAACGTC TGATCATGGA AAGACTGATT GAAACAGATC AGCAGATCCT GGTGAAAAAT ACCAAGCTAC CGGTCGAAGA TATGGGAAAA CAGCCGGAAC CTTTAGTTTA A
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Protein sequence | MKDEHIIEAI GMTRIVIRNG KVVEVGEPAV DFCPLAKRFA TPVDPITKES VQKNIESRIK TFGMCTKERQ VLDQETFVLF GASELMSTGL RTKTLDAAVI CSDGAGTVIV RTPDLVQGLG GRMSGLVSTT PHPEVIRKIE ESGGIVIDKE TAKLDVLAGL TRAKAEGWTK TAVTVAGFQH ELAEEIRAEY PEALIIAVHT SGVASAENAE RLVAASDLVF ACASKYVRAA VSKALVQGGV GVPVYAMTRA GKRLIMERLI ETDQQILVKN TKLPVEDMGK QPEPLV
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