Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_0305 |
Symbol | |
ID | 4795274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | - |
Start bp | 289553 |
End bp | 291268 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640098953 |
Product | preprotein translocase subunit SecD-like protein |
Protein accession | YP_001029748 |
Protein GI | 124485132 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4870] Cysteine protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.303617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATAC CAACCCGCCT TCTTCTCCTC GGACTTCTCC TCGCCTCGCT CTTCATCATC CCCGCCGCCG CAGACCTGCC GTCCTCCTAC GATATGCGGG ATGTAAACCT CACCCCCGTG ATTACCGATC AGGGAATCTA TGGGGTCTGC TGGGCTTTCG CCAGCATCAG TTCGCTTGAG TCCAGTATGA TCAGACAGGA TCCAGAAACA TACACCGGCA TCGATCTCTC CCCGTTTTCG GTGGTCTACT ACACCTACAA CCGTGATGAA CTGGTCGACC TCGCATCTCC ATATCCGGGA CTCGAAGGGA TAGCGGGCGA CACCACGCAC ATCGATGAAA TCGATCCGCC GGACAACATC TCCGGGCTTC TTCTCGGGGG AGATCTAACC CAGGCGATGT ATACTCTTGC CGCCGGATTC GGCGCCGTCA ATGAATCCAC CACCCCCTTC GATTCCTACG GGAACAATAC CGCCCCATCA GCAGACACGG CGATATCGGA GAACGAGATC GTTCTGGACT CCGTAATTAT AATCCCACCG ACGGAAATCG AAGACGTAAA GACGATGATG CTCGAAAAGG GAGCACCTGC GGTCGGATTT TTCTTTAATC CTGCCGAGCC CTATCTGGAA GAGCTGGAAA ACGGGGACTG GATGTATTCT CTTGGAGATA CAAACAGGGA AGACCTGGAA TCAGCCGGAG GGCATGCAGT TATTCTGATC GGCTGGGATG ATGCATTTTC TAAAGAGCAG TTCTATGTGA CGCCAAAACA GGACGGCGCA TGGCTGGCCC AGAATTCGTG GGGGAGCAAT CTCTCGAACA TCACCTACTT CTGGATGCCG TATGAGGAAC TGACCTATCC GATCACGTTC TTCGTCGGAA CCGAGCCATG GGTCGGGCAC ACTTATCAGT ATGACGGGGG AACGCTAGTT CTGAATGAAT CCTTGACCCA AACTTCGGCA TCCATCAGCA ATATTTTCAC ATGCGGCGGG AATGAAGAGA TCCAGGCCGT ATCTCTCGAT ACGAACCAGT CGGTGAACTA CACGCTGCGT GTTTACACCG ATCCTCTGCC GGATGAGCCG GATTCCGGGA CACTGCTTGC AGAGCAGGAG GGGGTAATCG CATTCCCCGG ATACTATACG ATCCGGCTGG ATGAGCCGGT CCCAATCGAG AAGGGGCAGA CCTTTTCGGT TGTCTACGAT CTTGAGGGGA GGGAGCCTCT GAATATCTCG ATCGACACCT CCGCAGTGTC AGAGGAGGTC GAGACGGTGA CCTTTGCAAA AGCGGGCCAG AGTTATCTGA ATGACGGGAC GGGGTGGACG GATCTGAGCG CGGACGGGAA GACAAATCTG CGGATCAAGG CGTTTACAAA CGACATGGTG TTTTGGATCG GTATGGATCC AATCTCCGCT TCGATGAAGG AGCGAAGTGT TTCGGTTTCC GGAACGACGA ACTTCGCGGC CGGAAAAGAG ATCATGGTTA CACTTTTCTA CCCGGATGGG GAGGTTAAAA GGGAGACGGC AGTGGTGAAG AAAGGTTCTC TGGCAAATTT CTGGGAGGTT ACGTTCTCTC CAGTGAAGAT GACGGAGGAG GAGTTTTTTG TGTCGGCGGA GCGAAACGGG GTGCTGATGG AGAGCGGATT TGTGCCGGAA GGGTTTACAG GGATGCTGGT TTTCGGGGAG AAACAGACGA TCCTGCCGGC GATGGGAGTG ATTTAG
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Protein sequence | MSIPTRLLLL GLLLASLFII PAAADLPSSY DMRDVNLTPV ITDQGIYGVC WAFASISSLE SSMIRQDPET YTGIDLSPFS VVYYTYNRDE LVDLASPYPG LEGIAGDTTH IDEIDPPDNI SGLLLGGDLT QAMYTLAAGF GAVNESTTPF DSYGNNTAPS ADTAISENEI VLDSVIIIPP TEIEDVKTMM LEKGAPAVGF FFNPAEPYLE ELENGDWMYS LGDTNREDLE SAGGHAVILI GWDDAFSKEQ FYVTPKQDGA WLAQNSWGSN LSNITYFWMP YEELTYPITF FVGTEPWVGH TYQYDGGTLV LNESLTQTSA SISNIFTCGG NEEIQAVSLD TNQSVNYTLR VYTDPLPDEP DSGTLLAEQE GVIAFPGYYT IRLDEPVPIE KGQTFSVVYD LEGREPLNIS IDTSAVSEEV ETVTFAKAGQ SYLNDGTGWT DLSADGKTNL RIKAFTNDMV FWIGMDPISA SMKERSVSVS GTTNFAAGKE IMVTLFYPDG EVKRETAVVK KGSLANFWEV TFSPVKMTEE EFFVSAERNG VLMESGFVPE GFTGMLVFGE KQTILPAMGV I
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