Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_0140 |
Symbol | sdhA |
ID | 4796021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | - |
Start bp | 126977 |
End bp | 128605 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640098787 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_001029584 |
Protein GI | 124484968 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATCG AGAATACAAA AGACTGTCAC GTACTTGTCA TAGGGTCGGG CGGCGCCGGA ATACGTGCCG CCGTTGAGGC GGAAACGTTT GGCGAGACGA TCATTGTCTC GAAAACGATC ACCGGGAAAG GCGGGTGTAC CGTCATGGCA GAAGGCGGAT TCAATGCCGT ATTGAATGAA GAAGATTCGA TACAGACCCA TTTCGAGGAT ACGATGAAGG GCGGGGCGTT TCTCAACGAT GAATTACTCG TGCAGACACT CGCAAGCGAA GCCCCGAACA GGATCCGTGA TCTTTTTTCC TGGGGGGCCG TCTTCGATCT GAAAGAAGAC AATACGATAG CTCAGCGGCC TTTCGGCGGA CAGCGGTGTG CCAGAACCTG TTATGCGGGA GACCACACGG GTCACGAGCT GGTGATGACC CTTCTCGAAA AACTCCGGGG TTCATCAGTC GAGATCGAAA ATGAAGTGAC GGTCCTTGAT CTCCTTTCAG ACGATGGAAA AGTAAACGGG GCGATCACGT GTGATCGGGA GGGAGAACTT GGGATCATTA CGGCCGATGC GGTGATCCTT GCGACCGGCG GGGCCGGCCA GGTCTACGAC ACGACGACCA ACTCGACGGC CGGGACCGGA GACGGATACG CTCTTGGCTA CCGGGCCGGA GCACAGCTCA TCGATATGGA ACAGGTCCAA TTCCACCCGA CCGGAGCCGT AACTCCTTAC GATTCACGCG GAAGGCTGAT CACCGAAGCG GTGAGAGGAG AGGGAGGCAT CCTGAAAAAC GCACTCGGGG AACGGTTCAT GGCGAAATAT GATCCGGCAC GTATGGAGCT TTCCACCCGC GATGTCGTGG CACGGGGAAT TGCCACCGAA GTTCTCGAAG GGCGGGGCAC CTCCCATGGG GGTGTCTGGC TGGATGTCAG TCATCTTCCG CGTGAACAGA TCGAAACACG CCTTCCGATC ATGCTGAATC AGTTCCTGCA GTTCGGTGTG GATATCAGAA ACGAACCGAT GGAGGTCGCA CCGACCGCCC ACCATTTCAT GGGCGGGATA AAGATAACGC CGGAAGCAAA AACAACGGTG CCTCATCTTT ATGCAGCCGG AGAAGTAACC GGCGGTGTTC ACGGAGGAAA CCGTCTTGGA GGAAATGCTC TTGCCGATAC GCAGGTGTTT GGGAGAAGGG CAGGCATCTC GGCAGGAAAA ACAGAACGGA CGGCAAGAAA AATCGACATG GATCAGATCA GAGCGGCTGA AAACAGACTG GAATCCTATT ATGAAGGTAC GGCGAAATCC GCCGATATCA GACGGGCCAT GAAGATGATG ATGTGGAACA ATGTAGGGAT CTACCGAAAC GAACTCGACC TGAGAGTTGC CGAAAGGGAG ATCAAAAAAC TGCAGAACAC ACAGCTGAAG ATCGCTTCGC CCCGCGAACT TTCCGATGCC GTGGTCACGG AAAATATGTT GCTTGTCGCC CAGCTCGTTA TCGAAGGAGC ACTCCTCCGA AGAGAGTCAC GAGGGGCCCA CACCCGGACC GATGTGAAGC AGAGCTGGAC GAACGAGACA TCGCCGTTCG GCCACACCTT CTTTGTCAAA GGCAAATCAG GGATAGAAAT TCTGGAGGAT AGATTATGA
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Protein sequence | MGIENTKDCH VLVIGSGGAG IRAAVEAETF GETIIVSKTI TGKGGCTVMA EGGFNAVLNE EDSIQTHFED TMKGGAFLND ELLVQTLASE APNRIRDLFS WGAVFDLKED NTIAQRPFGG QRCARTCYAG DHTGHELVMT LLEKLRGSSV EIENEVTVLD LLSDDGKVNG AITCDREGEL GIITADAVIL ATGGAGQVYD TTTNSTAGTG DGYALGYRAG AQLIDMEQVQ FHPTGAVTPY DSRGRLITEA VRGEGGILKN ALGERFMAKY DPARMELSTR DVVARGIATE VLEGRGTSHG GVWLDVSHLP REQIETRLPI MLNQFLQFGV DIRNEPMEVA PTAHHFMGGI KITPEAKTTV PHLYAAGEVT GGVHGGNRLG GNALADTQVF GRRAGISAGK TERTARKIDM DQIRAAENRL ESYYEGTAKS ADIRRAMKMM MWNNVGIYRN ELDLRVAERE IKKLQNTQLK IASPRELSDA VVTENMLLVA QLVIEGALLR RESRGAHTRT DVKQSWTNET SPFGHTFFVK GKSGIEILED RL
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