Gene Mlab_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0066 
Symbol 
ID4795648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp68129 
End bp69457 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content40% 
IMG OID640098711 
Producthypothetical protein 
Protein accessionYP_001029511 
Protein GI124484895 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.144243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00001391 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCCCG AATCCAACAT AACTGAATAT AAACGTGAAC ATCCCACATC AATCGAGAGA 
ATGGAAAAGG ATGTCGTCGC TTTCTTAAAT AGCGAGGGAG GGACAGTCTA TTTTGGAATA
GACGACAACG GAGATATCCT TCATATTCCA GATATTGATG ATTTGCAGTT AAAATTGAAA
GATAGGATTA AAAATAACAT CTCTCAACCT GCATTAGATT ATTGTAAGAT AACAATTGAA
ATACGCGACT CACACTATAT CGTTGTTCTG ACTATTCAGG CAGGATGGGA AAAGCCATTT
TATCTGAAGA AATACGGGAT GACACCGAAA GGCTGTTTCA AACGTGCCGG TAGCGCATCA
GAACCAATGA ACGCGGGAGA GATTGAGAGC ATATTTGCCA AACGGGTGAG GAACAGCCTA
AAAAATATTC CATCACCACG TCAGGACTTG ACATTTCGTC AATTGAATAT ATATTATGAT
GGAAAAGGCA AAGTTCTCAA CGACTATTTC TTGCTCAATC TTAAATTGCT TATTGATGAC
GGGAAATTTA ACTACGCAGC TTATCTTCTG GCTGATGAAA ATGATAATTC AGTTAAGTTT
GCGAAATATG CAGACGATAC TCGTGCTGAT TTGATTTCAA ATGAGGAATA CGGATGCTGC
TGTCTTGTAA AAATATTCGA ACGTATAAGC GATCGGCTGA TTGCTGAGAA TACAACCTTC
ACAAAAATAA CTATGAAACG CAGGCTCTCA CGCAAATTGA TTGATACGGC GGCCCTGCGC
GAAGCTGTTC TTAATGCCTT GCTGCACAAT GATTATGCTA ATTTCTCTTA TCCAAAAATA
GAATTCTTCT CTAACCGTGT TGAAATTACT TCGATGGGAG GGTTGCCTTA TGGTCTATCT
GAAGAAGCGT TCTTTTCAGG AGCGTCTAAT CCGCGCAATC AGGAACTTAT GAGAGTTTTT
CGTGATTTGG GGGTCGTGGA GGAGCTCGGA TCTGGTGTTC CGCGTATCCT GAAGGCTTAT
GGTAAAGAGG TGTTTCAAAT CAACGAATCA TTTATCCGAG TCACCCTTCC ATTTACAAAA
GATTTTGAGG CAACTGTTTT AAAGGAGAGT CCGGGGGAAG TCCCCCATAG TTGTTTAAAT
CTTGGGATTA ATGAAAAAAA GATTCTTGCG TTAATTTCTG GAAATCCAAA CATTACAGCT
CAGGAATTAT CTCGTGACAT CGGGATCTCA GAGAGAAGTG TGCGATATAT CCTTGCAAAT
TTGAAACAGA AGAATATTAT TCATAGAAAA GGCTCAGATA GAACAGGCTC ATGGGAAATA
CTGAACTGA
 
Protein sequence
MNPESNITEY KREHPTSIER MEKDVVAFLN SEGGTVYFGI DDNGDILHIP DIDDLQLKLK 
DRIKNNISQP ALDYCKITIE IRDSHYIVVL TIQAGWEKPF YLKKYGMTPK GCFKRAGSAS
EPMNAGEIES IFAKRVRNSL KNIPSPRQDL TFRQLNIYYD GKGKVLNDYF LLNLKLLIDD
GKFNYAAYLL ADENDNSVKF AKYADDTRAD LISNEEYGCC CLVKIFERIS DRLIAENTTF
TKITMKRRLS RKLIDTAALR EAVLNALLHN DYANFSYPKI EFFSNRVEIT SMGGLPYGLS
EEAFFSGASN PRNQELMRVF RDLGVVEELG SGVPRILKAY GKEVFQINES FIRVTLPFTK
DFEATVLKES PGEVPHSCLN LGINEKKILA LISGNPNITA QELSRDIGIS ERSVRYILAN
LKQKNIIHRK GSDRTGSWEI LN