Gene Mlab_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0054 
Symbol 
ID4795667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp55254 
End bp56213 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content51% 
IMG OID640098699 
Producthypothetical protein 
Protein accessionYP_001029499 
Protein GI124484883 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0287578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAA AAACCCTGGT GCTTGGCATC CTGGAAAAAA ATCCCGGTGC GTATGTATCG 
GGGGAATACA TCGCTTCCGA GCTTTCGGTC TCGAGAACTG CTGTATGGAA AGCGATTCGG
ACACTGCAGA GTGAAGGCTA TAATATCACA GCAGTATCCA ACAAAGGATA TCTTCTGGAA
AACTCAGATG TCCTCTCGGC TGAAGGCATT CGCTCCAGAC TTCTGCCGAA GTATGCCGAT
ACGGTCGTCA TCGTCAAGAC TTCGACTGAA TCGACGAACA TCGACGCAAA AGTTCTGGCC
GCCGCCGGAG CAAAACACGG AACCGTGATC CTTGCAGAGG AGCAGACTGC CGGCAGAGGG
AGATACGGAA AATCTTTTTA CTCCCCCAAA GGCACAGGGA TCTATCTGAG TATCATCGCC
CGGCTTGGGA TCTCCTTTTC GGACGCGGTA ATGATCACGA CTGCGGCGGG CGTTGCCGTC
TGCAGATCGA TCGAATCCGT TTCCGATCTT GATCCGAAAA TCAAATGGGT CAACGATATA
TTTTTGAACG GGAAAAAGAT CTGCGGGATC GGGACCGAGG CGGTCAGCAA TATCGAATCG
GGAATGCTCG AGTCGGTGAT CGTCGGAGTC GGTGTGAACT TCAAAACCTC AGAGTTCCCG
GAGGATCTAA AAGATATCGC GGGTCCGCTG TTTCCAAAGG ATTTCCCGCT CACGAGAAAT
GCGTTTGCCG CAGTTTTGAT CAATCATCTG CTGGATATGT TTGCCGCTCT TCCTGAGAAG
AGTTTCATCG GGGAGTACCG TGAGAGATCT CTTATTCTTG GAAAAGAGAT CATGTTTCTC
GAGAAAAATG TCTGGCACTC TGCAAAAGCA GTTGACATCG ACGACAAAGG CGGGCTGGTT
GTCGAAGCCG ACGGAAAAAT CAGGACACTG ACCTCGGGTG AGGTCAGCGT TCGCATTTAG
 
Protein sequence
MTTKTLVLGI LEKNPGAYVS GEYIASELSV SRTAVWKAIR TLQSEGYNIT AVSNKGYLLE 
NSDVLSAEGI RSRLLPKYAD TVVIVKTSTE STNIDAKVLA AAGAKHGTVI LAEEQTAGRG
RYGKSFYSPK GTGIYLSIIA RLGISFSDAV MITTAAGVAV CRSIESVSDL DPKIKWVNDI
FLNGKKICGI GTEAVSNIES GMLESVIVGV GVNFKTSEFP EDLKDIAGPL FPKDFPLTRN
AFAAVLINHL LDMFAALPEK SFIGEYRERS LILGKEIMFL EKNVWHSAKA VDIDDKGGLV
VEADGKIRTL TSGEVSVRI