Gene Mlab_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0003 
Symbol 
ID4795244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp2316 
End bp3479 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content54% 
IMG OID640098648 
Productaminotransferase 
Protein accessionYP_001029448 
Protein GI124484832 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATT TTGTATCAAA GGTAGCTGCC GAGATCCCTC CCTCGGGCAT CAGAAAGTTC 
TTCGATCTCG TCCTCACGAT GGATAACGAT AAGGTTATCA GTCTGGGCGT CGGGGAACCG
GATTTCGATA CCCCCTGGAA CGTTTCCAAA GCTGCCATCA CATCCATCGA GAAAGGGCTG
ACGATGTACA CGTCGAACCG TGGTCTGCCC GATCTCTGTT CCGCTTTGTC CAAGGATCTG
GAGCAGCGGT ATCATACCCC GTACTCTCCA AGCGAGATCA TCGTGACGAC CGGCGTATCG
GAAGGTTTCG ATGTTGCCGT TCGAACCGTC GTGAATCCCG GCGATGAAGT GATCGTTGTT
GATCCTTGTT TTGTTTCCTA CAAATCCGAA GTGCTTATGG CAGGCGGAAA ACCCGTCTCC
CTTCCCTGCG ATGCGAAGGA TCAGTTCAAG GTCACGCCCG ACGCACTGAT GGAAAAGATC
ACGCCGAACA GCAAAACGCT GATCATCAAC TTCCCGAACA ATCCGACCGG GGGTGTCATG
GGCAAAGACG ATCTGAAAGC TATCGCCGAT ATCATCATCG ATCACGATCT TCTGCTGATC
TCGGATGAGG TCTACTCGGA ACTGACCTAC GAAGGTTCCC ATGTCTCGGC GGCGTCGATC
GACGGCCTTT GGGACCGGAC GATCACGCTG AACGGTTTTT CCAAGGCATA TGCGATGACC
GGATGGCGGC TTGGATATCT GTGTGCGCCA AAGGAGATCT GCGATGCCGC ACTCAAGATC
CACCAGTATG TGATGATGTC GGCCCCGACC TCGTCCCAGT TTGCTGCGAT CGAGGCACTT
AAGAACGCCG AGGAGGCAAA GAACCAGATG GTTGCCGAGT ACCGGATCAG AAGAAACCTG
TTCGTTAAGG GTCTCAACGA TGTCGGTCTG CCCTGCCATC TTCCCAAGGG AGCGTTTTAT
GCGTTCCCGT CGATCGAAGG CACCGGTCTT TCCGACGAGG AGTTTGCCGA GCGTCTCTTA
ACCGAGCAGC AGGTGGCTGT CGTTCCGGGC AGTGCATTCG GCGAAAGCGG CGTTGGTCAT
ATCCGTACCT GTTATGCGGT GGATCGTGCA AAACTCACCG AGGCCGTGCG CAGAATCGGG
GTATTTGTCG AGTCACTTTC GTGA
 
Protein sequence
MRNFVSKVAA EIPPSGIRKF FDLVLTMDND KVISLGVGEP DFDTPWNVSK AAITSIEKGL 
TMYTSNRGLP DLCSALSKDL EQRYHTPYSP SEIIVTTGVS EGFDVAVRTV VNPGDEVIVV
DPCFVSYKSE VLMAGGKPVS LPCDAKDQFK VTPDALMEKI TPNSKTLIIN FPNNPTGGVM
GKDDLKAIAD IIIDHDLLLI SDEVYSELTY EGSHVSAASI DGLWDRTITL NGFSKAYAMT
GWRLGYLCAP KEICDAALKI HQYVMMSAPT SSQFAAIEAL KNAEEAKNQM VAEYRIRRNL
FVKGLNDVGL PCHLPKGAFY AFPSIEGTGL SDEEFAERLL TEQQVAVVPG SAFGESGVGH
IRTCYAVDRA KLTEAVRRIG VFVESLS