Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_5605 |
Symbol | |
ID | 4610359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008703 |
Strand | - |
Start bp | 115012 |
End bp | 116556 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639789268 |
Product | hypothetical protein |
Protein accession | YP_935603 |
Protein GI | 119854998 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0664947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGGCA CCCCTCCAGT ACCCGACGAG CATCCGTCGC CTCAAACGCT GCCCGAAGTT GGAGCCCGCA CCGCGACGGT CCTTGTGTTC ACTTCTTCGG CTGCGGTGCT GGTGGTAGAA ATCACCGCGC TGCGGTTGCT TGCGCCGTAC CTCGGGCTGA CCCTGGAAAC CAGCACCCTG GTCATCGGAA TCGCCTTGGC CGCAATTGCC CTTGGGTCCT GGGCGGGCGG CCGGCTTGCC GACCGCGATG ATCCGCGCCG CTGGCTGGGG ACATCGCTAG GGGTATCAGG GGTAGTCGTG GCCTTCACGC CTTCCGCCGT CCGCGCGGCG GCCGAATGGG CACCTGCGAC GCTGTTGCTA GTCGCGACGC TCACGATTCT GGCACCCGGA GCGTTACTAT CGGCGGTGAC ACCGATGGTG ACCAAGCTGC GCCTGATCAA GCTCGCCCAG ACCGGCACCG TTGTCGGTCA GTTGTCTGGT GTAGGCACCA TGGGTGCCAT CGCCGGCACC GTGCTTACCG GATTTGTCCT CGTGTCGCGG ATACCAGTGA GCGTGATACT CATCGGACTC GGATCGATAC TGGTACTCGG CGGCATCGTT GTGCAGTGGC GCATGCGCCG ACGGAACACC GTAAGCGCCA CCGTACTAAC GCTTACAACC GTCGGCGCCG GCCTGGCTGG CTACGTCGCA CCCGGCGGTT GCGACGTGGA AACCAAATAC CATTGCGCCC AAGTCATCGC CGACCCGGAG CGAGACAGCG GCCGAATCCT CATGCTCGAT GGCGCGCGCC ACTCGTACAT AGACCTCCAA GATCCGGCTC TCCTGCAATT CATCTACGTG CGCGCCTTTG CTTCGGTCGT CGACGCATCC TTCCCCTCCG AGAAGGCATT GGAGGCATAC CACCTTGGTG GGGGCGGCCT CACCTTCCCG CGGTACCTTG CTGCTACGCG GCCAGGAACA CGCAACGTGG TGTCCGAAAT CGACGGCGGC GTGGTGCGCA TAGACCGAGA CAAACTCGGA TCGGCTTCCA ACGCTGGGAC ACAGGTGCGC GTCGAGGACG GCCGCCTGGG CCTTGCGCGG CTCGATGACG ACAGCCGTGA TCTGATCGTC GGCGACGCCT TTGGCGGCGT GAGCGTGCCA TGGCACCTGA CGACGGTGGA AGCGTTGACA GACGTACGCC GAGTCCTCAA AGACGACGGT ATGTACATTG CCAATCTCAT CGATTACGGC GAGCTGGCGT TTGCGCGTGC CGAAGTCTCA ACACTCACAG AGATTTTCGA TCACGTCATA GTCGCCGCCG AGGCCGGCGA CGTCGGCGTC GATACCGCTG CGACACCCGA TGGTGGCAAC CTGGTCGTGC TCGCTTCCGA TCGACCAGTT GACCCGGACA CGCTTCAGCG CGTTCTGAAC ACCCGCAAAA CCGGGTGGAC GATCACTGCC GGCAAAGAAC TCAGCAGGTG GATCGGCGAC GCGCGAGTTC TGACAGACGA CTACGCGCCC GTCGATCAAC TTCTCGATCC CTACCGTCGA CAGACCGGCG AGTGA
|
Protein sequence | MTGTPPVPDE HPSPQTLPEV GARTATVLVF TSSAAVLVVE ITALRLLAPY LGLTLETSTL VIGIALAAIA LGSWAGGRLA DRDDPRRWLG TSLGVSGVVV AFTPSAVRAA AEWAPATLLL VATLTILAPG ALLSAVTPMV TKLRLIKLAQ TGTVVGQLSG VGTMGAIAGT VLTGFVLVSR IPVSVILIGL GSILVLGGIV VQWRMRRRNT VSATVLTLTT VGAGLAGYVA PGGCDVETKY HCAQVIADPE RDSGRILMLD GARHSYIDLQ DPALLQFIYV RAFASVVDAS FPSEKALEAY HLGGGGLTFP RYLAATRPGT RNVVSEIDGG VVRIDRDKLG SASNAGTQVR VEDGRLGLAR LDDDSRDLIV GDAFGGVSVP WHLTTVEALT DVRRVLKDDG MYIANLIDYG ELAFARAEVS TLTEIFDHVI VAAEAGDVGV DTAATPDGGN LVVLASDRPV DPDTLQRVLN TRKTGWTITA GKELSRWIGD ARVLTDDYAP VDQLLDPYRR QTGE
|
| |