Gene Mkms_5568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5568 
Symbol 
ID4610495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008703 
Strand
Start bp76225 
End bp77430 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content68% 
IMG OID639789232 
Productmajor facilitator transporter 
Protein accessionYP_935567 
Protein GI119854962 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGC CCAACTCTGC CGATACAGGC CTCGGGGGGA GCCGAACTCA GTTGTTGCCT 
TTGTACGCGG CGGGATTCGT CACCGCATTC GGCGCTCACA GCATTGCCGC CACCTTGGGC
GGCTATATCG ACGGGCCATA CACATCGCTG CTCACCCTGG GCCTGCTGCT GGCCATCTAC
GACGGAGCCG AAGTCATCCT CAAACCGGTA TTCGGATCGT TGGCCGATCG CATTGGCGCC
CGCCCAGTTC TGCTCGGCGG ACTGCTCGCT TTCGCCGCGG CATCCGCTGC CTTCGTCATC
GCTGGAGATC CTGCCTGGTT GGGCGTGACC CGATTCGCTC AGGGCGCCGC CGCAGCAGCA
TTCTCACCTG CCGCCGGGGT ATTGGTGTCG CGGCTAACCG CGCCGGGGCA GCAAGGCCGC
GGCTTCGGTC GCTACGGTGC CTGGAAAGGA CTTGGCTACA CCCTGGGACC GGTATTGGGA
GGGGTGCTCA TCACCTGGGG CGGCTACACC CTGCTCTTCG CCACGCTCGC CACACTAGGA
ACGGCGGTCG CAGCGTGGGC GCTGCTGATG GTGCCGGGGG TGGCACCGTT GCCGCGGGTC
CGCCAGACGG TACTCGACCT GGGCCGCCGA CTCGCCAGCC CGGGCTTTCT GCGCCCGACC
CTCGCACTAG CCGCGGCCAC CGCCGCATTA TCGGTCGGTG TTGGCTTCCT CCCCGTCATC
GGCGCCAGCC GCGGCCTCAG CCCACTTCTC ACCGGAGCGG TCGTCTCGGT GTTGGCAGCG
GCGACCGCCG TAGTTCAGCC CGGGGTTGGG CGCGCTCGCG ATGACGGGCG CATCGGGGAC
CGCACCGGGT TGTCAACCGG CCTACTGCTC GCTGCCGCCG GGTGCGCGGC GGTGGTGATA
CCAGGAATCA TGGGCCTGGC CAGCGCTGCC GTACTGATCG GCATTGGCGT AGGCGTCGTC
ACCCCGATCG GGTTCGCCTC TCTGGCCGCG TCCACTCCCG CTGAACGGCT CGGCCAAACC
ATGGGCTCTG CCGAAGTGGG CCGCGAACTC GGAGATGCCG GTGGGCCACT ACTCGTCGGC
GCCCTCGCCG CCGCGGCCAC CTTGACCCCT GCGCTACTGG TACTCGCTAC TGTCCTAGCC
GCCACCGCCG CGCTCAGCAC CGCGCCCAGC GCCGGTCGTC ACGCCCAAAC CAGCAATGAC
ACCTAG
 
Protein sequence
MSTPNSADTG LGGSRTQLLP LYAAGFVTAF GAHSIAATLG GYIDGPYTSL LTLGLLLAIY 
DGAEVILKPV FGSLADRIGA RPVLLGGLLA FAAASAAFVI AGDPAWLGVT RFAQGAAAAA
FSPAAGVLVS RLTAPGQQGR GFGRYGAWKG LGYTLGPVLG GVLITWGGYT LLFATLATLG
TAVAAWALLM VPGVAPLPRV RQTVLDLGRR LASPGFLRPT LALAAATAAL SVGVGFLPVI
GASRGLSPLL TGAVVSVLAA ATAVVQPGVG RARDDGRIGD RTGLSTGLLL AAAGCAAVVI
PGIMGLASAA VLIGIGVGVV TPIGFASLAA STPAERLGQT MGSAEVGREL GDAGGPLLVG
ALAAAATLTP ALLVLATVLA ATAALSTAPS AGRHAQTSND T