Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_5472 |
Symbol | |
ID | 4613156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | + |
Start bp | 5709181 |
End bp | 5710956 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639795166 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_941447 |
Protein GI | 119871495 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0765] ABC-type amino acid transport system, permease component [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.693793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.393619 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTCG GACGGATCGC CGCACTGATC ACGACGATGC TGATGGTGGC GACGCTGTGT TGCGCCGCGC CGGCCGGCGC GCAGGTCGAC CAGTGCGCCC CGCCTGGCGT GGAAAGCGCC AGCGCGCTGC CCACCAACCT CGCTGCCGCC GCACAGGGTC CGGAAGCCGA CCGTTACACC ACGGCGAACG TGCGCCCTCT CGACAGCATC GACGTCGACG CGCTGGGGCT CGGCACCCCC GGTGTGCTGA CCGTCGGGAC GCTGTCGGAC GCGCCGCCGA GCATCTGCAT AGACTCCTCC GGTCAGTTCA CCGGGTTCGA CAACGAACTG CTGCGTGCGA TCGCCGAGAA GCTGGGCCTG CGAGTCAATT TCGTCGGCAC CGAATTCTCC GGGCTGCTCG CCCAGACCGC GGCCCGGCGG TTCGACGTCG GGTCGTCGTC GATCACCACC ACCGACGCGC GCCGGCGCAC CGTCGGCTTC ACCAACGGCT ACGACTTCGG GTACTTCTCG CTGGTCGTGC CCAGCGGATC CCCGATCGAC GGGTTCGGCA AGCTGGGCCC GGGGCAGCGC ATCGGCGTCG TGCAGGGCAC CGTGCAGGAG GCCTACGTCG TCGACACACT GCGCCTGCAG CCGGTGATCT TCCCCGACTA CAACACCGTC TACGCCAGCC TCAAGACCGG GCAGATCGAT GCGTGGGTGG CCCCGTCGGC GCAGGCCGAG GGCACCGTGC AGGCGGGCGA TCCGGCGCAG ATCATCGAGA ACACGTTCAG CCTGGACAAC TTCATCGCCT ACGCCGTCGC CAAGGAGAAC CAGCCGCTGA TCGACGCGCT GAACTCCGGA CTCGACGCGG TGATCGCCGA CGGCACCTGG GCCCGGCTGT ACTCCGACTG GGTGCCGCGC GCCCTGCCGC CGGGGTGGAA ACCCGGTTCG AAGGCGGCGC CCGCACCGGA GCTGCCCGAC TTCCAGGCCA TCGCCGCGCA ACAACAGGAG TCCGACGCCG GCCCGGCCGC ACCGAAATCG ACGCTGCGCC AACTGTCCGA CTCGTTCCTC AACTGGGACC TCTACCGACA GGCCGTTCCG GACCTGCTCA AGACCGGCCT GCCGAACACG TTGATCCTCA CCGTCAGCGC CGCGGTCATC GGCCTGGTCC TGGGGATGGC GCTCGCGGTC GCCGGGATCT CCCGGTCCCG GCTGCTGCGG TGGCCGGCGC GGGTCTACAC CGACATCTTC CGCGGCCTGC CCGAGGTGGT GATCATCCTG CTCATCGGGC TCGGCGTCGG ACCGATCGTC GGCGGGCTGA CCGGTAACAA CCCGTTCCCG CTCGGCATCG CCGCACTCGG GTTGATGGCC GCGGCCTACA TCGGCGAGAT CTTCCGGTCC GGCATCCAGA GCGTGGAGTC CGGACAGCTC GAAGCCTCCC GCGCGCTAGG CTTCAGCTAC TCGTCGTCGA TGCGGCTGGT GGTGATCCCG CAGGGGGTGC GCCGCGTGCT GCCCGCGCTG ATGAACCAGT TCATCTCGCT GCTCAAGGCG TCGTCACTGG TGTACTTCCT CGGACTGGTC GCCGACCAGC GCGAGCTGTT CCAGGTCGGC CGCGACCTCA ACGCCCAGAC CGGAAGCCTC TCACCTCTTG TCGCCGCGGG CCTGTTCTAT CTTCTGCTGA CCATCCCGCT GACCCATCTG GTGAACTACG TCGACGCCCG GTTGCGCCGC GGCCGCCGGC CCACCGAAGA GGATCCGCCC ACCCTGCAAC CGGCGGCGAC CCAGGAGATG ATCTGA
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Protein sequence | MNVGRIAALI TTMLMVATLC CAAPAGAQVD QCAPPGVESA SALPTNLAAA AQGPEADRYT TANVRPLDSI DVDALGLGTP GVLTVGTLSD APPSICIDSS GQFTGFDNEL LRAIAEKLGL RVNFVGTEFS GLLAQTAARR FDVGSSSITT TDARRRTVGF TNGYDFGYFS LVVPSGSPID GFGKLGPGQR IGVVQGTVQE AYVVDTLRLQ PVIFPDYNTV YASLKTGQID AWVAPSAQAE GTVQAGDPAQ IIENTFSLDN FIAYAVAKEN QPLIDALNSG LDAVIADGTW ARLYSDWVPR ALPPGWKPGS KAAPAPELPD FQAIAAQQQE SDAGPAAPKS TLRQLSDSFL NWDLYRQAVP DLLKTGLPNT LILTVSAAVI GLVLGMALAV AGISRSRLLR WPARVYTDIF RGLPEVVIIL LIGLGVGPIV GGLTGNNPFP LGIAALGLMA AAYIGEIFRS GIQSVESGQL EASRALGFSY SSSMRLVVIP QGVRRVLPAL MNQFISLLKA SSLVYFLGLV ADQRELFQVG RDLNAQTGSL SPLVAAGLFY LLLTIPLTHL VNYVDARLRR GRRPTEEDPP TLQPAATQEM I
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