| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_5210 |
|---|
| Symbol | |
|---|
| ID | 4612893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 5453019 |
|---|
| End bp | 5454809 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639794907 |
|---|
| Product | trehalose synthase |
|---|
| Protein accession | YP_941189 |
|---|
| Protein GI | 119871237 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | [TIGR02456] trehalose synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCACA GCAGCGGCTC ACCCGCCCAC CCCGATCACG ATCCGGCCGA GGGCAGCCAC
ATCGAGGACG GGGTGGTCGA ACATCCGACC GCAGGGGACT TCGGCCACGC GCGGATGGTC
CCCGAGGACC GGACGTGGTT CAAGCGGGCC GTGTTCTACG AGGTGCTCGT GCGTGCGTTC
CACGATTCGG ACGCCGACGG TTCCGGTGAC CTGCGCGGGC TGACCGAACG ACTGGACTAC
CTGCAGTGGC TCGGCGTCGA CTGTCTGTGG CTGCCGCCGT TCTACGATTC ACCGCTGCGC
GACGGTGGAT ACGACATCCG CGACTTCTAC AAGGTGCTGC CCGAATTCGG CACCGTCGAG
GACTTCGTCA CGCTGCTCGA CGCCGCCCAC CGCCGCGGCA TCCGGGTGAT CACCGACCTG
GTGATGAACC ACACCTCGGA CTCCCACCCG TGGTTCCAGG AGTCGCGCCG CGACCCGGAC
GGACCCTACG GCGACTTCTA CGTCTGGAGC GACACCAGCG ACAGGTACGC CGACGCGCGG
ATCATCTTCG TCGACACCGA GGAGTCCAAC TGGACCTTCG ACCCGGTGCG GCGGCAGTTC
TATTGGCACC GCTTCTTCTC CCACCAGCCG GATCTGAACT ACGACAACCC GGCCGTGCAG
GAGGCGATGC TCGACGTGCT GCGCTTCTGG CTCGACCTCG GCATCGACGG GTTCCGGCTC
GACGCCGTGC CGTACCTGTT CGAACGCGAG GGCACCAACT GCGAGAACCT GCCGGAGACC
CATGCGTTCC TGCGGCACTG CCGCAAGGTG ATCGACGACG AGTATCCGGG CCGGGTGCTG
CTGGCCGAGG CCAACCAGTG GCCGGCCGAC GTGGTCGCGT ACTTCGGTGA CCCGGACACC
GGCGGCGACG AGTGCCATAT GGCGTTCCAT TTCCCGCTGA TGCCAAGGAT TTTCATGGCC
GTCCGGCGCG AGTCGCGGTT CCCGATCTCC GAGATCCTCG CGCAGACACC GGAGATCCCG
GATATGGCGC AGTGGGGGAT CTTCCTGCGC AACCACGACG AGTTGACCCT CGAGATGGTC
ACCGACGAAG AACGTGACTA CATGTACTCC GAATACGCCA AAGACCCACG GATGAAAGCG
AATGTCGGCA TCCGGCGGCG TCTGGCACCA CTACTGGAGA ACGACCGCAA TCAGATCGAA
TTGTTCACCG CGCTGCTGCT CTCACTCCCC GGGTCACCGG TGCTGTACTA CGGCGACGAG
ATCGGCATGG GCGACATCAT CTGGCTCGGT GACCGCGACG GTGTCCGCAC CCCGATGCAG
TGGACGCCGG ACCGCAACGC GGGCTTCTCG AAGGCCACGC CCGGCCGCCT GTATCTGCCG
CCCAACCAGG ACGCCATCTA CGGTTACCAG GCGGTGAATG TCGAAGCGCA GCGGGACAGT
TCGAATTCGC TGCTGAACTG GACGAAGACC ATGCTCGGGG TGCGCAGACG CCACGACGCG
TTCGCGATCG GCGCGTTCCG CGAACTCGGC GGGTCGAACC CGTCGGTGCT GGCGTTCGTG
CGTGAGACCG CCACCGACAC GGTGCTCTGC GTCAACAACC TGTCCCGCTT CCCGCAGCCC
ATCGAACTGA ATCTGCAGCA GTGGAACGGT TTCACGCCGG TCGAGATGAC CGGCTACGTC
GACTTCCCGA GTATCGGGGC GCTGCCCTAC CTGCTGACCC TGCCCGGCCA CGGGTTCTAC
TGGTTCCAGC TACGCGCCCC CGACCCCGAA CCCGAAGGAG TGCAGCCATG A
|
|---|
| Protein sequence | MDHSSGSPAH PDHDPAEGSH IEDGVVEHPT AGDFGHARMV PEDRTWFKRA VFYEVLVRAF
HDSDADGSGD LRGLTERLDY LQWLGVDCLW LPPFYDSPLR DGGYDIRDFY KVLPEFGTVE
DFVTLLDAAH RRGIRVITDL VMNHTSDSHP WFQESRRDPD GPYGDFYVWS DTSDRYADAR
IIFVDTEESN WTFDPVRRQF YWHRFFSHQP DLNYDNPAVQ EAMLDVLRFW LDLGIDGFRL
DAVPYLFERE GTNCENLPET HAFLRHCRKV IDDEYPGRVL LAEANQWPAD VVAYFGDPDT
GGDECHMAFH FPLMPRIFMA VRRESRFPIS EILAQTPEIP DMAQWGIFLR NHDELTLEMV
TDEERDYMYS EYAKDPRMKA NVGIRRRLAP LLENDRNQIE LFTALLLSLP GSPVLYYGDE
IGMGDIIWLG DRDGVRTPMQ WTPDRNAGFS KATPGRLYLP PNQDAIYGYQ AVNVEAQRDS
SNSLLNWTKT MLGVRRRHDA FAIGAFRELG GSNPSVLAFV RETATDTVLC VNNLSRFPQP
IELNLQQWNG FTPVEMTGYV DFPSIGALPY LLTLPGHGFY WFQLRAPDPE PEGVQP
|
|---|
| |