Gene Mkms_5111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5111 
Symbol 
ID4612794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5363396 
End bp5364211 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content70% 
IMG OID639794808 
ProductCof-like hydrolase 
Protein accessionYP_941090 
Protein GI119871138 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.569864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTGC CCGCGATGAT CGCCACCGAT GTGGACGGCA CGCTGCTCGA TGACGACGAG 
AAGGTCTCGC CGCGCACCCG CGCGGCCGTC CACGCCGCCG TCGACGCAGG CGTGCACTTC
GTGCTCGCGA CGGGACGCCC ACCCCGCTGG GTGGCGCCGG TGGTCGACGG GCTCGGCCTG
GCGCCGATGG CGGTGTGCGC CAACGGCGCG GTGATCTACG ACCCGGCCGC CGACCGCATC
GTGTCCGCGC GCACCCTGTC CATCGACGCG CTGGCCGAAC TGGCCGATAT CGCCGCCCGG
GTCATTCCGG GTTCCGGTCT GGCCGTCGAG CGGGTCGGCA GCTCCGCCCA CGACGCGGCG
ACCCCGCAGT TCGTCAGCTC ACCCGGCTAC GAACACGCCT GGCTGAACCC GGACAACACC
GAGGTCTCGC TCGACGATCT GCTCAGCGCC CCCGCGGTCA AGCTGCTCAT CCGCAAGTCG
GGGGCGAGCA GTGCCGAGAT GGCCGCCGAA CTCGCCAAGC ACATCACCGT CGAGGGAGAC
ATCACCTATT CGACGAACAA CGGGCTGATC GAGGTCATGC CGTCGGGTAT CAGCAAGGCC
AGCGGTATCC GCGAGCTCGC GGGTCCGCTC GGGTTGGTCG CCGGCGACGT GGTGACGTTC
GGCGACATGC CCAACGACGT GCCGATGCTG CGCTGGGCCG GTCACGGTGT GGCGATGGGC
AACGCGCACC CGGAGGCGGT GTCGGCCGCC GACGAGGTCA CCTCCCGCAA CACCGACGAC
GGGGTCGCCC GCGTCCTCGA ACGCTGGTGG ATGTAG
 
Protein sequence
MTLPAMIATD VDGTLLDDDE KVSPRTRAAV HAAVDAGVHF VLATGRPPRW VAPVVDGLGL 
APMAVCANGA VIYDPAADRI VSARTLSIDA LAELADIAAR VIPGSGLAVE RVGSSAHDAA
TPQFVSSPGY EHAWLNPDNT EVSLDDLLSA PAVKLLIRKS GASSAEMAAE LAKHITVEGD
ITYSTNNGLI EVMPSGISKA SGIRELAGPL GLVAGDVVTF GDMPNDVPML RWAGHGVAMG
NAHPEAVSAA DEVTSRNTDD GVARVLERWW M