Gene Mkms_5011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5011 
Symbol 
ID4612690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5250557 
End bp5251153 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content66% 
IMG OID639794704 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_940990 
Protein GI119871038 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCA TCGAGTCCGA GGACATCGAC TGCACCGCCG ATCTGAAAGC CCGCTTCGCC 
GCCGATGTCT GGCCCCTGGT CGATGTGCTG CTCCGCGGCG CGCGCCGCCT GACCCACAAC
GACGCCGACG CCGAAGACCT GCTTCAGGAA ACCCTGGTCC GCGCCTACAC CGGATTCCAC
AACTTCCAGC CGGGCACCAA CCTTCAGGCG TGGCTCTTCC GGATCCAGTA CAACCAGTGG
GTAAGCGCCT ACCGGTGGAA GGAGCGCCGC CCCGCGGAGG TGCTGTCCGA CGAGATGGCG
GACTTTGGTG TGCACCTGTC GACCGGGCTG CGGTCCGCCG AATCCGAGGT GATCGATTCG
CTTCCCGACG ATGGGGTACG CGAGGCGTTG GGTCAGCTCT CCGAGGGCTT CCGGACCGTG
CTGTACTACG CCGACGTCGA GGGCTACACC TACGCCGAAA CCGCTGCACT GATGGGCATC
CCGATCGGGA CGGTGATGTC GCGGGTATCG CGGGCGCGTG TTCAGTTGCG CCGCCTGCTG
GCGGACAGTT CCTGTGCACG CGGTCGTTTC GCATCTGGGT CCTCTCAGGC GGCTTGA
 
Protein sequence
MKVIESEDID CTADLKARFA ADVWPLVDVL LRGARRLTHN DADAEDLLQE TLVRAYTGFH 
NFQPGTNLQA WLFRIQYNQW VSAYRWKERR PAEVLSDEMA DFGVHLSTGL RSAESEVIDS
LPDDGVREAL GQLSEGFRTV LYYADVEGYT YAETAALMGI PIGTVMSRVS RARVQLRRLL
ADSSCARGRF ASGSSQAA