Gene Mkms_5001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5001 
Symbol 
ID4612680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5241264 
End bp5242289 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content72% 
IMG OID639794694 
Productpeptidase S1 and S6, chymotrypsin/Hap 
Protein accessionYP_940980 
Protein GI119871028 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.951966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATGC TCCGTACTCG TTGGCTGTCC GTGCTCTCGG TCGTGTTGGC CGCGCTACTC 
GCACTGGTGG GCCCGTTCTC CCCGGCCACC TCGAGCGCCG CACCCGCTGA TCCGATCGCG
GCGGCGGCCA CCGTCGAGCC CGCCGTGGCG CGCATCGACA CCGAGATCGA CTACCAGAGC
GCGATCGGTA CCGGCACCGG CATCGTGCTC GACCCCGGCG GTCAGGTGCT GACGAACTTC
CACGTCGTCC AGGGCGCCGA CCGGGTCAAC GTCGCCGTCG CGGGCCGGTC GTATCCGGCC
GAACTCGTCG GCTACGACCG TGGCCGCGAC ATCGCGGTGA TCCAGTTGCT CGGGGCGGGC
GGTCTGCCGG TGGCCCCGAT CGGCGACTCC GCGGCGCTGG CGGCGGGTGA GCCCGTCGTC
GCCCTCGGCA ACGCGCAGGG CTCCGCTGCC CCGCTGACCC GGGAGGTCGG CAGCGTCACC
GCCTTCGGGC GGACGGTCCA GGCCGAAGAC TCGCTGACCG GCAGCTCCGA CGAACTGACC
GGGTTGATCG AGTTCGCCGC ACCCGTGCGG GCCGGCGATT CGGGTGGACC GGTCGTCAAC
AGCGCGGGCC AGGTCGTCGG CATCACCACC GCGGCCTCGG TGAACTACCG GATGGGCCCC
GGGGGTAAGG GCTTCGCGAT CCCGATCAAC GAGGCGGTCG GCGTCGCGAA CCAGATCCGG
TCGCGGATTC CGTCGGACAC CGTCCACATC GGCCCGCCCG CGCTGCTCGG CGTCGGCGTG
CGGACCGCAC CTAGCGACGT GCCCGGGGTC CTCATCCAGG AGGTGCTGCG CGGCGGACCC
GCCGAAGCGG CCGGTTTGAT GGACCGCGAC GTGCTGATCG CGATCAACGG CAACCGCCTC
ACCTCGGCCA CCCAACTGAC CTACACGCTG GACCGGTTCT ACCCCGGCGA CGTCGTGGAC
GTCACGTGGA TCGACGGCTT CGGCCAGGAG CGCACCGCGA AGGCGACGCT GGCACCCGGC
CCCTAG
 
Protein sequence
MGMLRTRWLS VLSVVLAALL ALVGPFSPAT SSAAPADPIA AAATVEPAVA RIDTEIDYQS 
AIGTGTGIVL DPGGQVLTNF HVVQGADRVN VAVAGRSYPA ELVGYDRGRD IAVIQLLGAG
GLPVAPIGDS AALAAGEPVV ALGNAQGSAA PLTREVGSVT AFGRTVQAED SLTGSSDELT
GLIEFAAPVR AGDSGGPVVN SAGQVVGITT AASVNYRMGP GGKGFAIPIN EAVGVANQIR
SRIPSDTVHI GPPALLGVGV RTAPSDVPGV LIQEVLRGGP AEAAGLMDRD VLIAINGNRL
TSATQLTYTL DRFYPGDVVD VTWIDGFGQE RTAKATLAPG P