Gene Mkms_4800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_4800 
Symbol 
ID4616215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5032549 
End bp5033319 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content70% 
IMG OID639794491 
ProductHAD family hydrolase 
Protein accessionYP_940780 
Protein GI119870828 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.785854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGACG GCGTACCGAC AGATCTCCGC CAGGCGCTCG ACGGCGCCGC ACGACTTCCG 
CGTCTGCTGA TCGCCTGTGA CTATGACGGC ACGCTGGCGC CGATCGTGTC CAACCCCGCC
GACGCCCGTC CGCTGCCCGC GTCGGCGGCC GCGGTGGAGG AACTGGCTGC GCTGCCCGCC
ACCACGGTCG CGCTGATCTC CGGCCGCGCA CTGGGCGTGC TCAAGGAGCT CTCCGGGGTG
TCCGGCCGTG TGCACCTGGT CGGCAGCCAC GGAGCGGAGT TCGACACCGG GTTCCTGTCC
CCCATCGATG AGCGGGCCGA AGCACTGCTG GTCGAGATCA AACAGACCCT CGATGAGATC
GCCGCCGAAT ACGCCGGTGT GACAACCGAA CTCAAACCCG CCAGTGTCGC GCTGCACGTG
CGCAACGCCT CGACCGACGA CGGTGAAGCG GCGATGCACC GCGCGAACGA GGCGGCCGCG
CGGTGGGATG CGCAGGTCAC CGACGGCAAG GCGGTCAAGG AGTTCGCCGT CATCCAGACC
GACAAGGGAC AGGCCGTCGA CATCCTGCGC GATCAGCACG ACGCCTCGGC GGTGCTGTTC
CTCGGCGACG ACGTCACCGA CGAGAAGGCG TTCCGCCGGA TGCGCGACGG CGACATCGGT
GTGAAGGTCG GCCCCGGCGA CACCGCGGCG GCGTACCGGG TCGACGAACC CCGCGACGTG
GCCGAGGTGC TCGAGTACCT GCTGGCCGGG CGGCGTCGTG CTCACTCCTG A
 
Protein sequence
MADGVPTDLR QALDGAARLP RLLIACDYDG TLAPIVSNPA DARPLPASAA AVEELAALPA 
TTVALISGRA LGVLKELSGV SGRVHLVGSH GAEFDTGFLS PIDERAEALL VEIKQTLDEI
AAEYAGVTTE LKPASVALHV RNASTDDGEA AMHRANEAAA RWDAQVTDGK AVKEFAVIQT
DKGQAVDILR DQHDASAVLF LGDDVTDEKA FRRMRDGDIG VKVGPGDTAA AYRVDEPRDV
AEVLEYLLAG RRRAHS