Gene Mkms_4444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_4444 
Symbol 
ID4612387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4677448 
End bp4678467 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content71% 
IMG OID639794130 
ProductDeoR family transcriptional regulator 
Protein accessionYP_940425 
Protein GI119870473 
COG category[K] Transcription 
COG ID[COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0599387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGATAC CGACGTCAAC TCCCGCAGCG AACGGCCGGG CGTCGCAACG CTCGCCGGAG 
GACCTGCGGT TGGCGCTGCG TGCGGCCACG CTGTACTACC TCGACGGCCT CACCCAGGCC
GAGATCGCCG GCCGCCTCGG GGTCTCCCGT CCCACCGCCG GCCGACTCGT CGCGCGCGCC
AAAGCCCGCG GCCTCGTGCG GATCGACATC GTGGTCCCGC CGGACCTGCA GGATGATCTG
CACGCCGACG AGGAACGCGA ACTCGAGGTG CGCTTCGGCC TCACCGAGGT GGTGATCGCC
GGCCACGGCG TCGACATCGG TGCACCCGGG CGGCCCGCCG CGTACGCCAG CGTCGGGCGC
GCGGCCGCCG CGCTGCTGAT GCGCCGACTG GAGGCCGACG ATGTCCTGGG CTTCACCTGG
GGGCCCGAAC AGGTGGCTGT CGCGACCGCG CTGACACCGG GAATGGCGAC CTGCCGCGCG
GTGGTGCAAC TCGACGGCGC CATGTCCAGC GCCGCCTATC AGACCGGCGT CGAGCTGATC
CTCGGCCGAT GCGCGGACAT ACTGCACGCC AACACCATTC GCCTGCCGGC ACCGCTCTAC
GCCGATCCGT CCACCGTCGC ATCCATGCGC AGCGACTCGG TCATCTCCCG CACATTGGAG
GCGGGCCGGC GCGCCGACGT GATGATGTTC GGGGTCGGTG CGGTCTCGAC CTCGACCACC
CTGTTCGAGG GCAGCTACCT CGACACCCGG ATGCTCGACG AGCAGATCGC CGCCGGTGCG
GTCGGTGAGA TCGGGGGCCG GTTCTTCGAC GAGCGCGGCG TCCCCGTCGA CACCGAACTC
CAGCAGCGCG CGGTGTCCGT TCCGCTCGAG GACGTCCGGG CCTGCGAGAA GACGATCCTG
ATCGCCAGCG GCGCCGAGAA ACACCGGGCC ACCCTCGCCG CGCTCCGCGG CCGGTTGGCC
CGGATGTTGG TTTGCGACGT CGACTGTGCA CGTTGGCTTC TCGACCACGG AAAGGGGTGA
 
Protein sequence
MAIPTSTPAA NGRASQRSPE DLRLALRAAT LYYLDGLTQA EIAGRLGVSR PTAGRLVARA 
KARGLVRIDI VVPPDLQDDL HADEERELEV RFGLTEVVIA GHGVDIGAPG RPAAYASVGR
AAAALLMRRL EADDVLGFTW GPEQVAVATA LTPGMATCRA VVQLDGAMSS AAYQTGVELI
LGRCADILHA NTIRLPAPLY ADPSTVASMR SDSVISRTLE AGRRADVMMF GVGAVSTSTT
LFEGSYLDTR MLDEQIAAGA VGEIGGRFFD ERGVPVDTEL QQRAVSVPLE DVRACEKTIL
IASGAEKHRA TLAALRGRLA RMLVCDVDCA RWLLDHGKG