Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_4438 |
Symbol | |
ID | 4612381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | - |
Start bp | 4669757 |
End bp | 4672033 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639794124 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_940419 |
Protein GI | 119870467 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase [COG3285] Predicted eukaryotic-type DNA primase |
TIGRFAM ID | [TIGR02776] DNA ligase D [TIGR02777] DNA ligase D, 3'-phosphoesterase domain [TIGR02778] DNA polymerase LigD, polymerase domain [TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0862477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGGATC ACTTCGGTCG GGTGCGCCTG ACCAACCCGG ACAAGGTGCT GTACCCGGCG ACGGGCACCA CCAAGGCCGA GGTGTTCGAG TACTACGTCG ACGTGGCCGA GGCGATGGTG CCGCACATCG CCGGCCGGGC GGTCACCCGT AAGCGCTGGC CCAACGGCGT CGGCGAGCTG GAGTTCTTCG AGAAGCAGCT GGCCAGCTCC GCACCCGACT GGCTCGCGCG CGGCACGATC GTGCACAAAT CCGGCACCAC CACCTACCCG ATCATCGACA CCCGCGAAGG TCTGGCGTGG ATCGCGCAGC AGGCCGCGCT GGAGGTGCAC GTGCCGCAGT GGCGGTTCGT CGGATCGGGT GGCGACTTGA CTCCCGGCCC GGCCACCCGC ATCGTGTTCG ACCTCGACCC CGGCGAGGGC GTCACGTTCC GTCAGCTGTG CGAGGTCGCG CACGAGGTCC GCGACCTGAT CACCGACATC GGGCTCACGG CCTATCCGCT GACCAGCGGC AGCAAGGGCC TGCACCTCTA CGTCCCGCTC AAGGAGCCGA TCAGCTCCCA GGGCGCGTCG GTGCTCGCTA AACGCGTCGC CCAACAGCTC GAGAAGGCCA TGCCCAAACA GGTCACCGCC ACGATGACCA AGAGCCTGCG CGAGGGCAAG GTGTTCCTCG ACTGGAGCCA GAACAACGGC AACAAGACCA CGATCGCGCC GTACTCCCTG CGCGGCCGCG AGCATCCAAC GGTTGCGGCG CCGCGCACCT GGGAGGAGAT CGAGGACCCC GACCTGAGAC ATCTGCGATT CGACGAAGTG CTCGAGCGGA TCGAGGAGTT CGGGGACCTG CTGGCCGATC TCGACGAGTA CGTGCCTGTC GAGGACCGGC TCACCAAGTA CCGCAGCATG CGCGACCCGT CGAGGACGCC GGAGCCCGTG CCGCCGCTAC CGCCGAAGGC CGGCAACAAC GACCGCTTCG TGATCCAGGA ACACCATGCC CGGCGGCTGC ACTACGACCT GCGTCTGGAA CGCGACGGTG TGCTGGTCAG CTGGGCGGTG CCGAAGAACC TGCCCGACCG GCCCTCGGAG AACCACCTCG CCGTGCACAC CGAGGACCAT CCGATGGAGT ACCTCACCTT CCACGGCACC ATCCCGAAGG GTGAGTACGG CGGCGGCGAC ATGATCGTCT GGGACACCGG CACGTATGAG ACCGAGAAGT TCAACGACCA CGCCCCGGAC GGACCCGCCA AGGGCGGGGA GGTCATCATC ACCCTGCACG GCAACAGGAT CGACGGCCGT TACGCACTGA TCCAGACCGA CGGCAAGAAC TGGCTCGCGC ACCGGATGAA GGATCAGGGC AACCCGACGT TCGAGGACTT CGCGCCTATG CTGGCCACCC ACGGCTCGGT CGAGAAGTTC ACGGCGAAAC AGTGGGCGTT CGAAGGCAAG TGGGACGGCT ACCGGCTGCT GGTCGACGCC GACCATGGCA AGCTGTGCCT GAAGTCCCGC AGCGGCCGCG ACGTCACCGC AGAATATCCC CAATTGCGCG CGCTGGCAGC AGATCTCGCC GACCACCATG TCGTGCTCGA CGGGGAGGTC GTCGCCCTCG ATGACAAGGG CGTGCCGAGC TTCGGCCATA TGCAGAACCG GGCCCGGTCC ACCCGTGTCG AGTTCTGGGC GTTCGACATC CTGCGCCTCG ACGGCCGTTG GCTGCTGAAG GCGAAGTACC GAGACCGCCG AAAGCTGTTG GAGACGTTGG CCAGTGGGGG CGGACTGATC GTGCAACCCC TACTCGACGG CGACGGCCTC GAGGCTCTCG AGGACGCCCG CAAACGCAGG TGGGAGGGTG TGGTCGCCAA GAAATGGGAT TCCACCTATC AGCCGGGGCG GCGCTCGTCG GCGTGGATCA AGGACAAACT GTGGAACACC CAGGAGGTCG TGATCGGCGG GTGGCGCGAA GGCAACGGCG GCCGCAGCAG CGGCATCGGC GCACTGGTGC TCGGCATCCC CGGACCCGAC GGCCTGCAGT TCGTCGGCCG AGTCGGCACC GGGTTCACCG AGAAGGAACT CGGCAGTCTC AAGAAGACGT TGGCGCCGCT GCACACCTAC GAATCCCCCT TCGCGACAAG GCTTCCCACC CAGGACGCCA AGGGCGTGAC GTTCGTGCGG CCCGAACTCG TCGGCGAGGT GCGTTACAGC GAGCGTACCG GCGACGGCCG GTTGCGCCAA CCGTCCTGGC GGGGGCTGCG ACCGGACAAG ACGCCGGACG ACGTCGTGTG GGAGTAG
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Protein sequence | MVDHFGRVRL TNPDKVLYPA TGTTKAEVFE YYVDVAEAMV PHIAGRAVTR KRWPNGVGEL EFFEKQLASS APDWLARGTI VHKSGTTTYP IIDTREGLAW IAQQAALEVH VPQWRFVGSG GDLTPGPATR IVFDLDPGEG VTFRQLCEVA HEVRDLITDI GLTAYPLTSG SKGLHLYVPL KEPISSQGAS VLAKRVAQQL EKAMPKQVTA TMTKSLREGK VFLDWSQNNG NKTTIAPYSL RGREHPTVAA PRTWEEIEDP DLRHLRFDEV LERIEEFGDL LADLDEYVPV EDRLTKYRSM RDPSRTPEPV PPLPPKAGNN DRFVIQEHHA RRLHYDLRLE RDGVLVSWAV PKNLPDRPSE NHLAVHTEDH PMEYLTFHGT IPKGEYGGGD MIVWDTGTYE TEKFNDHAPD GPAKGGEVII TLHGNRIDGR YALIQTDGKN WLAHRMKDQG NPTFEDFAPM LATHGSVEKF TAKQWAFEGK WDGYRLLVDA DHGKLCLKSR SGRDVTAEYP QLRALAADLA DHHVVLDGEV VALDDKGVPS FGHMQNRARS TRVEFWAFDI LRLDGRWLLK AKYRDRRKLL ETLASGGGLI VQPLLDGDGL EALEDARKRR WEGVVAKKWD STYQPGRRSS AWIKDKLWNT QEVVIGGWRE GNGGRSSGIG ALVLGIPGPD GLQFVGRVGT GFTEKELGSL KKTLAPLHTY ESPFATRLPT QDAKGVTFVR PELVGEVRYS ERTGDGRLRQ PSWRGLRPDK TPDDVVWE
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