Gene Mkms_4421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_4421 
Symbol 
ID4612364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4651514 
End bp4652263 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID639794107 
Productshort chain dehydrogenase 
Protein accessionYP_940402 
Protein GI119870450 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.794825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTC AGAGGATCCT GATCACCGGC GCGAGCTCCG GGCTGGGCGC CGGGATGGCC 
CGCGCGTTCG CCGCCAAGGG GCGTGACCTG GCGCTGTGCG CCCGCCGCGT CGACCGCCTC
GACGAACTCA AAGCCGAACT GAAGCAACGG TATCCGGAGA TCACCGTCGC AGTGGCCGAA
CTCGACGTCA ACGACCACGA CCAGGTGCCG AAGGTGTTCG CCGCGCTGTC CGACGAACTC
GGCGGCCTCG ACCGTGTGAT CGTCAACGCC GGTCTCGGCA AGGGCGCACC GCTCGGGTCG
GGCAAGCTGT GGGCCAACAA GGCGACCATC GAGACCAACC TCGTCGCGGC GCTCGTGCAG
ATCGAGACGG CGCTGGAGAT GTTCAAGCGC ACCGGTGCCG GACACCTCGT GCTGATCTCG
TCGGTGCTGG GCAACAAGGG CGTGCCCGGG GTGAAGGCCG CCTACGCCGC GAGCAAGGCC
GGCGTCTCGT CGCTGGGGGA GTCGCTGCGC GCCGAATACG CCAAGGGTCC GATCCGCGTG
ACGGTCCTCG AACCCGGTTA CATCGAGTCG GAGATGACCT CGAAGTCCGC GTCGACGATG
CTCATGACCG ACACCGATAC CGGCGTCGCC GCAATGGTCC GCGTCATCGA GAAGGAGGCC
GGCCGCGCCG CCGTGCCATG GTGGCCGTGG GCGCCGCTGG TGCAGCTGAT GCGGGTCCTG
CCGCCGCGGC TCACGCGACT CTTCGCGTGA
 
Protein sequence
MTRQRILITG ASSGLGAGMA RAFAAKGRDL ALCARRVDRL DELKAELKQR YPEITVAVAE 
LDVNDHDQVP KVFAALSDEL GGLDRVIVNA GLGKGAPLGS GKLWANKATI ETNLVAALVQ
IETALEMFKR TGAGHLVLIS SVLGNKGVPG VKAAYAASKA GVSSLGESLR AEYAKGPIRV
TVLEPGYIES EMTSKSASTM LMTDTDTGVA AMVRVIEKEA GRAAVPWWPW APLVQLMRVL
PPRLTRLFA