| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_4381 |
|---|
| Symbol | |
|---|
| ID | 4612324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 4600536 |
|---|
| End bp | 4602113 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639794067 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_940362 |
|---|
| Protein GI | 119870410 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.272943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.570588 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGAGGTT GCGGCGACCG TGTCGTTTCG GAGGACTGTG TCCGGTTTGG GGATCGGCTA
GCGCGTTTGT TTAAGGCCGG GGTGCCGGTG AAGGAGGCGG CGGTCGCTAC TGGGGTTTCG
CGTGACCGGT GTTATGCGAT TCTGCGGGCG ATCGGCCGGC CTGTCGGGCA GGCCCGTGGT
CGGGGTGAGC GCGCTGATCA GCGTGGGGTG GCCGACCTGG GTGTGGTCGT GGCCGTATTC
AAGGACACCG GTTCGATCCT GCAGGCGGCC ACAGCGTGTG GGGTGTCGCA TTCGACGGCA
CGCAAACTGT TGGTCGCCGA GGGGCTGGTG ACCAGCGGGA AGATCCCGTG GGGCAAGCCC
GAGGCGAAAC GTCGGTGCTT GGAGCTGTTC GAGCAGGGTT GGTCCACCGG GGCAGCGGCG
CGGGAGGTCG GTGTCAACGT GCGGACCGCG CGGGACTGGC GCAAGGGGAT CCGGCACACC
AACAACACGC GGGTTCACCC CGATGGTCGG GTCGTGGACT ACACCGACCA GACCGTCTAC
AAACAGTCGG TGAGCAACCT GATCTGCGAT GACACCGGAC GGCCGGCCAT CGATGACCGG
TATCTGTCGG TCCAGGACCG AGTGGCGATC GCCGATGGCC TCCTCGGGAA GGAGTCGTTA
CGGACGATCG CCGGGCGGAT CGGCAAAAAC GTTTCCACGG TGTCGCGGGA GATTCGTGCG
CGCAGCATTG ATGGCCGCTA TCTGCCGTAT CACGCCGATC GGGCGGCTGC CTCGGCCCGG
GCTCGGCCCA AGCAGTCCAA ACTGGTGGTC AACGTGGTCC TGCGGGGAGC GGTTGAAGAA
GGCCTGTCGC GCAAGCTGTC ACCGGAGCAG ATCTCCAATC GCCTCCGTCG GGATCATCCC
GACGACGAGA GCATGCAGGT GAGCCACGAA ACGATCTACC AAGCCCTCTA CTTCCAGGCC
CGCGGTGGCC TCAAAAAGGA AGTGCAGCAA GCACTTCGAA CCGGGCGCAC CCGACGCAAA
CCACACCGCA AAGAAGGCGA GCGCTATCAG CGCTTCACCG ACCCGATGGT GATGATCAGC
GACCGCCCAG CCGAGGTGGA CGACCGTGCG GTTCCCGGGC ATTGGGAAGG GGATTTGATC
ACCGGGGAGA AGAACCAGAC CGCGATCGGC ACTCTGGTCG AGCGATCGAC GCGCTACACC
ATGCTGGTGC ACCTGCCAGG CGGGCACGAC GCCGAATCGG TACGGGATGC GCTAATTGCG
ACTATCAGCA CTCTTCCGGC GCATCTGCGT GGCTCACTGA CTTGGGACCA AGGCTGCGAG
ATGGCAGGGC ACAAGCAGTT CACGATGGCC ACCGATATGG CCGTGTACTT CTGCGATCCG
GCCAGTCCCT GGCAGCGCGG CAGCAACGAG AACACCAACG GCCTGCTGCG CCAGTACTTC
CCCAAAGGCA CCGACCTGAG CATCTACGGA CCCGAGGACC TCGAACACGT CGCCCAGGAA
CTCAACGGCC GCCCACGCAA AACGCTCGGC TGGGATACCC CAGCCGAGCG CCTGCGTGAT
CTACTACTGA CCAATTAA
|
|---|
| Protein sequence | MRGCGDRVVS EDCVRFGDRL ARLFKAGVPV KEAAVATGVS RDRCYAILRA IGRPVGQARG
RGERADQRGV ADLGVVVAVF KDTGSILQAA TACGVSHSTA RKLLVAEGLV TSGKIPWGKP
EAKRRCLELF EQGWSTGAAA REVGVNVRTA RDWRKGIRHT NNTRVHPDGR VVDYTDQTVY
KQSVSNLICD DTGRPAIDDR YLSVQDRVAI ADGLLGKESL RTIAGRIGKN VSTVSREIRA
RSIDGRYLPY HADRAAASAR ARPKQSKLVV NVVLRGAVEE GLSRKLSPEQ ISNRLRRDHP
DDESMQVSHE TIYQALYFQA RGGLKKEVQQ ALRTGRTRRK PHRKEGERYQ RFTDPMVMIS
DRPAEVDDRA VPGHWEGDLI TGEKNQTAIG TLVERSTRYT MLVHLPGGHD AESVRDALIA
TISTLPAHLR GSLTWDQGCE MAGHKQFTMA TDMAVYFCDP ASPWQRGSNE NTNGLLRQYF
PKGTDLSIYG PEDLEHVAQE LNGRPRKTLG WDTPAERLRD LLLTN
|
|---|
| |