Gene Mkms_4355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_4355 
Symbol 
ID4612297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4575664 
End bp4576563 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content70% 
IMG OID639794040 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_940336 
Protein GI119870384 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0114769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCG AGCATGCCGA GCGATTCACG TCACTGCGAC CGCTGCTGTT CACGATCGCC 
TACGAAATCC TCGGCAGCGC AACCGAATCC GACGACGTAC TGCAGGACAG CTTCCTGCGC
TGGGCCGACG TGGACCTCGC GACGGTCCAC GACACCCGGT CCTACCTGGC GCAGTTGGTG
ACACGGCAGG CCCTCAACGC GGTGCGCACG AACGCCCGCC GCCGCGAGGA CTACGTCGGA
CCCTGGCTGC CCGAGCCCCT GCTGGTCGAC GACGGTGACG CCGCGTCGGA CGTGGTGCTC
GCCGAGTCGG TGTCGATGGC GAGGCTGGTG GTGCTGGAGA CGCTCACCCC CGACGAGCGG
GCGGTGTTCG TCCTGCGCGA GGTGTTCGGG TTCGACCACG CCGAGATCGC CGAAGCCGTC
GGCAAGTCCG TGGGTGCGGT GCGCCAGATG GCGTACCGCG CCCGCGAACA CGTGCACGCG
CGGCGCAAGC GGTTCGGGCC CGCCGACGCC GCCGACGCGG CGAAGGTCAC CGAGCAGTTC
ATGACGGCCG CGGCCACCGG CGACGTGGAG GGTCTGCTGG CGCTGCTCGC CCCGGACGCG
GTGTGGATCA CCGACAGCGG CGGACGCGCC AAGGCGATCC GGCGGCCGGT GCTGGGCGCG
AAGAAGGTGG CGGCCCTCAT CGCAGGGTTC TTCCGGGCGG CACCGAAGCA GGTGCCGGAC
CTCCGACTGG AGACGGCGAC CTACAACAAC ACCCCCGCGG TCCTGGTGCG CAGCGGCGAC
CGCGTGGAGG GGATGATCCT GATCGACGTC GTCGACGGCC GGATCGCGAA CTTCTACGCG
ATGGCCAACC CGGACAAACT GACCGGGATC GGCGTCGCCC GGACGATCCG CCGTCAGTGA
 
Protein sequence
MTTEHAERFT SLRPLLFTIA YEILGSATES DDVLQDSFLR WADVDLATVH DTRSYLAQLV 
TRQALNAVRT NARRREDYVG PWLPEPLLVD DGDAASDVVL AESVSMARLV VLETLTPDER
AVFVLREVFG FDHAEIAEAV GKSVGAVRQM AYRAREHVHA RRKRFGPADA ADAAKVTEQF
MTAAATGDVE GLLALLAPDA VWITDSGGRA KAIRRPVLGA KKVAALIAGF FRAAPKQVPD
LRLETATYNN TPAVLVRSGD RVEGMILIDV VDGRIANFYA MANPDKLTGI GVARTIRRQ