| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_4333 |
|---|
| Symbol | |
|---|
| ID | 4612274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 4552550 |
|---|
| End bp | 4553188 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639794017 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_940314 |
|---|
| Protein GI | 119870362 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.771402 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.443044 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCGC CTGACAAGGA AGTGCGCGCA CCCCGCGCCC GGATGACCGG CAGTGAACGG
CGCCAACAGC TCGTCGAGAT CGCCAAGTCG CTGTTCGCCC AGCGCGGTTA CGAGGGCACT
TCGATCGAGG AGATCGCGCA GCGCGCCAAC GTGAGCAAAC CCGTGGTCTA CGAACACTTC
GGCGGTAAGG AAGGGCTCTA CGCCGTGGTC GTCGACCGCG AGATGTCGGC GTTGCTCGAC
GGCATCACCT CGTCGCTGAC CAACAACCGC TCGCGGGTGC GGGTGGAGCG GGTCGCGCTC
GCGCTGCTGA CCTACGTCGA GGAGCGCACC GACGGCTTCC GCATCCTGAT CCGGGATTCA
CCGGCGGCGA TCACCTCGGG CACCTATTCG ACCCTGCTCA ACGACGCCGT CAACCAGGTC
AGCTCGATCC TCGCGGGTGA CTTCTCCCGC CGGGGGCTCG ATCCGGAGCT GGCGCCGCTG
TACGCCCAGG CCCTGGTGGG GTCGGTGTCG ATGACCGCGC AGTGGTGGCT CGACACCCGT
GAGCCCAAGA AAGAGGTCGT CGCCGCGCAT CTGGTGAACC TGATGTGGAA CGGCCTGACC
CATCTGGAGG CCGACCCGCG GTTGCAGGAC GAGGAGTGA
|
|---|
| Protein sequence | MAAPDKEVRA PRARMTGSER RQQLVEIAKS LFAQRGYEGT SIEEIAQRAN VSKPVVYEHF
GGKEGLYAVV VDREMSALLD GITSSLTNNR SRVRVERVAL ALLTYVEERT DGFRILIRDS
PAAITSGTYS TLLNDAVNQV SSILAGDFSR RGLDPELAPL YAQALVGSVS MTAQWWLDTR
EPKKEVVAAH LVNLMWNGLT HLEADPRLQD EE
|
|---|
| |