Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_4213 |
Symbol | |
ID | 4612153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | + |
Start bp | 4440708 |
End bp | 4441451 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639793897 |
Product | hemolysin III family channel protein |
Protein accession | YP_940195 |
Protein GI | 119870243 |
COG category | [R] General function prediction only |
COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.370881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACCC CGTCCACACC GATCGACGCC GACGAGCCGC GTTCGCCGGC CGATCCGGAG GACTTCCCCG AGGCAGTCGC CGAACGGGTA GCCCAGTTCA TCGGCAAGCC GCGGGCCCGC GGCTGGATCC ACGTCTACTC CGCCGTCGTC GCGGTGATCT GCGGGGCGAC GCTGGTGTCG GTGTCGTGGG CGGTCGTGTC CACCCGCGCG GGGATCGCGA CGCTGATCTA CACGCTCACG ATCGTGGCGA TGTTCGCCGT CAGCGGGACC TATCACCGGG TGAACTGGCG TTCCCCGGTG GCGCGCAAGT GGATGAAACG CGCCGACCAC TCGATGATCT TCATCTTCAT CGCGGGCAGT TACACACCGT TCGCCCTGCT GGCCCTGCCC GAGGGCAAGG GCATGGTGCT GTTCTGGATC GTGTGGGGCG GTGCGCTCGC CGGAGTGCTG CTCAAGATGT TCTGGCCGTC GGCCCCGGCG TGGGTCGGGG TGCCGCTGTA CCTGTTGCTC GGCTGGGTGG CGGCCTGGTT CATCGGCCCG ATCATGGACG GCGCGGGGGT CTCCGCGGTG GTGCTGCTGA TCGTCGGCGG CGCGCTCTAC AGCATCGGCG GGGTGCTCTA CGGGCTGAAG TGGCCCAATC CGTGGCCGAC GACCTTCGGC CATCACGAGT TCTTCCACGC GTGCACCGCC GTCGCGGCGA TCTGCCACTA CATCGCGATG TGGTTCGCGG TCTTCTCGAG CTAG
|
Protein sequence | MTTPSTPIDA DEPRSPADPE DFPEAVAERV AQFIGKPRAR GWIHVYSAVV AVICGATLVS VSWAVVSTRA GIATLIYTLT IVAMFAVSGT YHRVNWRSPV ARKWMKRADH SMIFIFIAGS YTPFALLALP EGKGMVLFWI VWGGALAGVL LKMFWPSAPA WVGVPLYLLL GWVAAWFIGP IMDGAGVSAV VLLIVGGALY SIGGVLYGLK WPNPWPTTFG HHEFFHACTA VAAICHYIAM WFAVFSS
|
| |