Gene Mkms_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3980 
Symbol 
ID4611920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4195508 
End bp4196179 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID639793664 
Productprotein of unknown function DUF899, thioredoxin family protein 
Protein accessionYP_939962 
Protein GI119870010 
COG category[S] Function unknown 
COG ID[COG4312] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.590341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCG ACCACCTTCC TCCGATCGTC TCGCGCTCGG AGTGGGAGCA CGCCCGCGCC 
GAACTGCTGG TCCGGGAGAA GGAGCTGATG AGGCTCAAGG ACAAGGTCAG TGCGGCGCGG
CGTCGCCTGC CCATGGTCGA GGTGGTCGAA CCGTATGTGT TCGACACCGA GAGCGGTCCG
GTCGGCCTGA TCGACCTGTT CGACGGCCGG CGCCAGCTGA TCGTGCAGCA CTTCATGTTC
GGCCGCGACT GGGAGCAGGG TTGTGAGGGC TGCTCGATGA TGGCCGACCA CCTCGGCCCG
CTGTCGCACC TGCACGCCAA GGACACGTCG TTGGTGCTGG TGTCCCGTGC GCCGCTCGGC
AAGCTGCTCG CCTTCCGTGA CCGGATGGGT TGGGATCTGC CGTGGGTGTC CTCCGGCGCG
TCGACGTTCA ACGAGGACTT CCACGTCACG GTCGACGGGG AGGAGCGCCA CGGCATCAGC
GTGTTCCTGC GCGACGGGGA CCGGGTGTTC CACACCTGGT CGACCTACAA CCGCGGCGAG
GAACCGTTCA TGGTCGTGTT CGACCTGCTC GACCTCACCC CGTACGGCCG TCAGGAGACC
TGGGAGGACT CGCCCGCCGG GTGGCCCCAG CGACCGCCCT ACGAGTGGAT CCGCCTGCAC
GACGCGTATT GA
 
Protein sequence
MAADHLPPIV SRSEWEHARA ELLVREKELM RLKDKVSAAR RRLPMVEVVE PYVFDTESGP 
VGLIDLFDGR RQLIVQHFMF GRDWEQGCEG CSMMADHLGP LSHLHAKDTS LVLVSRAPLG
KLLAFRDRMG WDLPWVSSGA STFNEDFHVT VDGEERHGIS VFLRDGDRVF HTWSTYNRGE
EPFMVVFDLL DLTPYGRQET WEDSPAGWPQ RPPYEWIRLH DAY