| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_3784 |
|---|
| Symbol | |
|---|
| ID | 4611719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 3998504 |
|---|
| End bp | 3999247 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639793464 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_939767 |
|---|
| Protein GI | 119869815 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.513657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.265032 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGGG TAGCGGTGGT GACCGGCGGC GCCTCGGGCA TGGGGGAGGC GATCTGTCAC
GAGCTCGGCA GGCGCGGACA CCGGGTCGCC GTGCTCGACC TCAACGGCGA TGCGGCGCAA
CGTGTCACCG AAGACCTACG CGCCGAGGGC GTGACCGCGC TGGGCGTGGC CGCCGACGTC
AGCAACCGCG CCGCGGTGGA GGAGGCCTTC GCCAAGGTAC GCACCGAACT CGGCCCGGTG
CACATCCTGG TCACCAGTGC CGGGCTGGTG GATTTCGCAC CGTTCCTCGA GATCACTCCG
CAGGCCTGGC AGAAGCTCAT CGACGTCAAC CTCACCGGAA CGTTCCACTG TTGTCAGGTC
GCGGTGCCGG ACATGCTCGA GGCGGGGTGG GGGCGGATCG TGATGATCTC GTCGTCGAGC
GCCCAGCGCG GTTCGCCCAA GATGGCGCAC TACGCCGCAT CGAAAGGTGC GCTGATCTCG
TTGACCAAAT CGCTGGCGCG CGAATACGGA CCGACCGGCA TCACGGTCAA CAACGTCCCG
CCGTCGGGTA TCGAGACGCC GATGCAACAC CACTCGCAGG CCGCCGGTCA CCTGCCGCCC
AACGAGCAGA TGGCCGCCAG CATCCCGGTG GGCCACCTCG GAACCGGCGA CGACATCGCC
GCCGCGGTCG GTTTCCTGTG CTCCAACGAG GCGGGATTCA TCACCGGTCA GGTGCTCGGA
GTCAACGGCG GATCGGTGCT GTGA
|
|---|
| Protein sequence | MTRVAVVTGG ASGMGEAICH ELGRRGHRVA VLDLNGDAAQ RVTEDLRAEG VTALGVAADV
SNRAAVEEAF AKVRTELGPV HILVTSAGLV DFAPFLEITP QAWQKLIDVN LTGTFHCCQV
AVPDMLEAGW GRIVMISSSS AQRGSPKMAH YAASKGALIS LTKSLAREYG PTGITVNNVP
PSGIETPMQH HSQAAGHLPP NEQMAASIPV GHLGTGDDIA AAVGFLCSNE AGFITGQVLG
VNGGSVL
|
|---|
| |