Gene Mkms_3401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3401 
Symbol 
ID4611328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3568136 
End bp3568753 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content72% 
IMG OID639793074 
Productmethyltransferase type 12 
Protein accessionYP_939385 
Protein GI119869433 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.476106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGA CGGTGGAGTT CTGGGAGGAG CACTACGGCG CGAAGGACCG GGTGTGGAGC 
GGCCGGGTCA ATGTTCGGCT GGCCGAGATC GTCGAACCGT TGCCGCCGGG GCGCGCGCTC
GACCTCGGCT GCGGCGAGGG TGCGGATGCG ATCTGGCTGG CCGGGCACGG ATGGCAGGTG
GTCGGCGTGG ACGTCTCGCA CACCGCGCTG CAACGGGCCG CCGAGGACGC CGCGGCAGCC
GGGGTGGCCG AGCGTGTCCG GTTCGAACAG CACGACCTGG CCGAGACGTT CCCCGAGGGG
CGGTTCGACC TGGTGTCGGC GCAGTTCTTC CATTCCCCGC TCGACGTGGA CCGCACCGGT
GCGCTGCGCC GGGCGGCCGA TGCCGTCACG GTGGGCGGGC TGCTGCTGAT CGTCGATCAC
GGAGCGACGC CGGAGTGGAC GTGGAAGGAC GGGCACCCGC ACGATCTGCC GTCGCTGCAG
GACGCCCTGG CGTCGCTGGC GGTGGACCCC GAGGCCTGGG AGGAACTCCG GGTCGAGGCG
GTCGAGCGGG ACGGGGTGAG CCCCGACGGG CAGCCGGTGA CGTGGCTGGA CAACGTCATC
CTGTTGCGGC GCCGCTGA
 
Protein sequence
MSETVEFWEE HYGAKDRVWS GRVNVRLAEI VEPLPPGRAL DLGCGEGADA IWLAGHGWQV 
VGVDVSHTAL QRAAEDAAAA GVAERVRFEQ HDLAETFPEG RFDLVSAQFF HSPLDVDRTG
ALRRAADAVT VGGLLLIVDH GATPEWTWKD GHPHDLPSLQ DALASLAVDP EAWEELRVEA
VERDGVSPDG QPVTWLDNVI LLRRR