| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_3291 |
|---|
| Symbol | |
|---|
| ID | 4611217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 3449574 |
|---|
| End bp | 3453389 |
|---|
| Gene Length | 3816 bp |
|---|
| Protein Length | 1271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639792964 |
|---|
| Product | sulfite reductase (NADPH) alpha subunit |
|---|
| Protein accession | YP_939275 |
|---|
| Protein GI | 119869323 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
|---|
| TIGRFAM ID | [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.362066 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTGA CCAGGACTGC GTGCTCGTAC TGCGGCGTCG GCTGCGGTAT CGAGGTGCAC
ACCGGCAGCG AAGGGGGCCG ACCCGTCATC GCCCGGGTGT CCGGAGATCG GTTGCACCCG
ACGAACTCCG GCCGGTTGTG CACCAAGGGT GCCACCCACG CTGAGATGAT GAACGCCACC
GACGGCCGGC TGACCTCGGC GCTGCTGCGG CCCACCCGCC ACGAGGAACC GGTTCCGGCC
CCGGTGGACG ACGCCGTCGC CGAGGCGGGG CGGCGGCTGC GGGCCATCGT CGACGAACAC
GGAGCCGATG CCGTCGCACT GTACGTGTCG GGTCAGATGT CGCTCGAATC GCAGTATCTG
GCAACCAAAT TGGCGAAGGG CTTCCTGCGC ACCAAGTACC TGGAGTCGAA TTCGCGGCTG
TGCATGGCCA GCGCGGCCAC CGGCTACAAA CAGTCGCTGG GCGCCGACGG GCCGCCGGGG
TCCTACACGG ACTTCGACGT CACCAACCTG TTCTTCGTCA TCGGGTCGAA TATGGCGGAC
TGTCACCCGA TCCTGCACCA GCGGATGGTC GACCGCCTCA AGACGGGCGC CAAGCTCATC
GTCGTCGACC CCCGCCGCAC CGCCACCGCC GACCGGGCCG ACCTGTACCT GCCGATCCGG
CCGGGCACGG ACGTGGCGCT GCTCAACGGG CTGCTGCACC TGCTGGTCGA GCGCGGCGAC
ATCGACGAGG AGTTCATCGC CGAGCACACC GAGGGCTGGG CGCACATGCC GGAGTTCCTC
GCCGACTACG CCCCGGCGCG GGTCGCCGCG ATCACCGGCC TCGCCGAAGC CGATCTGCAC
CGTGCCGCGG CCATGATCGC CGAGGCCGGC GACTGGGTGA CGTGCTGGGC GGTGGGGATG
AACCAGAGCA CCCACGGCAC GGCGAACACC AACGCGATCT GCAACCTGCA CCTGGCCACG
GGCGCCATCT GCCGACCGGG TGCCGGGCCG ATGTCGCTGA CCGGGCAGCC CAACGCGATG
GGCGGGCGCG AGATGGGCTA CATGGGGCCC GGCCTGCCCG GTCAACGTTC CATCCTCTCC
GCCGAGGACC GCGCGTTCGT CGAACAGCGG TGGGGTCTGC CGCCCGGCAC CATCCGCACC
GACGCCGGTC CCGGCGCGGT CGACATGTTC GAGCGGTTGG CCGCGGGCGA GATCAAGGCC
TGCTGGATCA TCTGCACCAA CCCGGTGGCG ACCATGCCGA ATCGCAGGAC CACGATCGCC
GGGCTGGAGG CCGCCGAACT GGTGATCACG CAGGACGTCT ACCGCGACAC CGCCACCAAC
CGGTACGCCG ACATCGTGCT GCCCGCCACC CTGTGGGCCG AATCCGATCA GGTGATGGTG
AATTCGGACC GTACGCTCAC GCTGTTGCAG CAGGCCGTCC CACCGCCCGG CCAGACCCGC
CCCGACTGGC AGCTGATCTG CCGGATCGCC GCCGAACTGG GGTTCGGCGC GGATTTCGCC
TACACCGACA GTGCCCAGAT CTTCGACGAG ATCCGCGAGT TCAGCAATCG CAGAACGGGT
TTCGATCTTC GCGGCGCGAC GTACGACCGG CTGCGCGAGA CGCCGCTGCA GTGGCCGGTC
CCTCCCGACG ACGGAACCGA CCGCCACCCG ATCCGCTACC TCAACGACGG TGTGAGCCAG
GATCTCCACG TCGACGCCTC CGGCCACCGC CCGCGGTTGG CGTTCCCGAC ACCGTCGCGG
CGCGCGGTCT TCTACGCCCG CCCGCACGTC GACGCCGCGG AACTGCCCGA CGGCGACTTC
CCGTTCGTGC TGAACACCGG GCGTCTGCCG CACCAGTGGC ACACCATGAC CAAGACCGGC
CGGGTGCGGG CCCTGGTCAA ACTCGACGGC CGGCCGTTCG TCGAAGTCCA CCCGCACGAC
GCCGCAGCCC TCGACATCGT CGACGGACAA TCGGTCGAAC TGACCTCGCG ACGCGGACGC
GCGGTGCTGC CCGCGGTGGT CTGCGATCGG GTGATGCCCG GAAACTGCTT TGCGCCATTC
CATTTCAACG ACGAACACGG CGAGTACCTC ACCGTCAACG CGTTGACCAA CGATGCGGTC
GACCCCGACT CGCTGCAGCC GGAGTTCAAG GTGTGCGCGG TGGCGCTGCG GCCGGTGCAG
ACGGTCGCCG CACCCACCGA AGAGCTCCGC ACCCCGGCGC CGGAACCCGT GGCATCGGAC
GGGCCGCTGG TGCTGTGGGC CTCGCAGACC GGCACCGCCG AGGACTTCGC CACCGACGTG
GCGGCCCGAC TGCCCGGTGC CCAGTTGGTC ACCATGGACG AGCTGCCGCT GCCGCGGTTG
GCCGAGGCGC GTGACGTCGT CGTCATCACC AGCACCTTCG GCGACGGCGG CCCGCCCGAC
AACGGGGCCG ACTTCTTCGA CCGGCTGCAG GGCCCGGACG CACCGAAGCT CGACCACATC
CGCTTCGCGG TGCTCGGGAT CGGCGACCGG TCCTACAGCG ACTTCTGCGG GCACGCCCGC
TCGCTGGACG GTCGGCTGGC CTCGCTGGGC GCCACCCGGA TGCTCGACCG GGTCGACTGC
GAAGCCTACG ACCAGGACCG CATGGAGCAC TGGGCCCAGC AGATGACCCA CCTGCTGAAC
CCGGACGGCG TGGACTCCGA CGGCGGCGGG GTCACCACGC GGCGGCGGAC CACGACCGTC
GCCGAACCGT TCACCCGGGC CAGGCCGCTG CTCGCGCCGC TGGCGCGCAA CACGCTGCTC
ACCCCGGCAG AGTCCCGAAA AGAGGTGCGG CACTTCGGCT TCGACATCTC CGAATACGAC
GTCACCTACG CCGCGGGCGA TTCACTGGGC GTCTACGCCA CGAACAGCGC GGTGGCCGTC
GACGCCTGGC TCGCCGCCAC CGGCCTCGAC GGAAGCGAGA AGGTCGACGT CGACGGTGCC
GAACACAGTC TGCGGGACGC GCTCACGGTC AGCTACGACT TCTGCCGCGT CACCCCGGAC
CTCATGCGGT TCGTGGCCGA GCAGTGCCGC GACCGCTCGG CGGCCAAGCG ACTGCGGGCG
GCGCGTGCCG ATCTGGACGC CTGGCTGGTC GATCGCAACG GTCTCGACGT GGTTCGCGAG
TTCGAGGTTC GCGCCGATCC GCGGCAGTGG CAGGAGGTGC TGGTGCGGCT GACCCCGCGC
CAGTTCTCCA TCAGCAGCAG TCCGCTCGTC AGCCCGCACG AGGTGCAGTT GACGGTGTCG
GTGGTGCGCT ACCGGGGCAG CGACGGCGGT GAGCGCGGAG GAGTGGCGAG CACGTTCCTC
GCCGACCGCG CCACCGCACC GCTTCCGGTG TTCCTGCAAC GCTCCCCGCA CTTCCGGCCA
CCCCGCGACG GCGTGACCCC GATGATCATG GTCGGACCGG GCACCGGCAT CGCCCCGTTC
CGGGCGTTCC TGCAGGAGCG CCGGGCGCTG GGACACACCG GGCCCAACTG GCTGTTCTTC
GGCGACCGCC ACCGCGACGA GAACTTCTAC TACCGCGACG ACCTCGAGGA CATGGTCACC
GACGGCTTCC TTCGCCTCGA CCTGGCGTTC TCCCGTGACC AGCCGAAGCC GGTGTACGTG
CAGCACCGGA TGCTCGAACA CGGTGCCGAG GTGTGGCGGT GGCTGGAACG CGGTGCGCAT
CTGTACGTCT GCGGTGACGC CGCCCGGATG GCCAAGGATG TCGATGCCGC CCTGACCACC
ATCATCCGGA AGCACGGCGG CCTGTCGGAA TCGGCTGCGC GCGAATACAA GAAGAGCCTC
GTCGCGGGGA AGCGCTACCT GCGCGACGTG TACTGA
|
|---|
| Protein sequence | MAVTRTACSY CGVGCGIEVH TGSEGGRPVI ARVSGDRLHP TNSGRLCTKG ATHAEMMNAT
DGRLTSALLR PTRHEEPVPA PVDDAVAEAG RRLRAIVDEH GADAVALYVS GQMSLESQYL
ATKLAKGFLR TKYLESNSRL CMASAATGYK QSLGADGPPG SYTDFDVTNL FFVIGSNMAD
CHPILHQRMV DRLKTGAKLI VVDPRRTATA DRADLYLPIR PGTDVALLNG LLHLLVERGD
IDEEFIAEHT EGWAHMPEFL ADYAPARVAA ITGLAEADLH RAAAMIAEAG DWVTCWAVGM
NQSTHGTANT NAICNLHLAT GAICRPGAGP MSLTGQPNAM GGREMGYMGP GLPGQRSILS
AEDRAFVEQR WGLPPGTIRT DAGPGAVDMF ERLAAGEIKA CWIICTNPVA TMPNRRTTIA
GLEAAELVIT QDVYRDTATN RYADIVLPAT LWAESDQVMV NSDRTLTLLQ QAVPPPGQTR
PDWQLICRIA AELGFGADFA YTDSAQIFDE IREFSNRRTG FDLRGATYDR LRETPLQWPV
PPDDGTDRHP IRYLNDGVSQ DLHVDASGHR PRLAFPTPSR RAVFYARPHV DAAELPDGDF
PFVLNTGRLP HQWHTMTKTG RVRALVKLDG RPFVEVHPHD AAALDIVDGQ SVELTSRRGR
AVLPAVVCDR VMPGNCFAPF HFNDEHGEYL TVNALTNDAV DPDSLQPEFK VCAVALRPVQ
TVAAPTEELR TPAPEPVASD GPLVLWASQT GTAEDFATDV AARLPGAQLV TMDELPLPRL
AEARDVVVIT STFGDGGPPD NGADFFDRLQ GPDAPKLDHI RFAVLGIGDR SYSDFCGHAR
SLDGRLASLG ATRMLDRVDC EAYDQDRMEH WAQQMTHLLN PDGVDSDGGG VTTRRRTTTV
AEPFTRARPL LAPLARNTLL TPAESRKEVR HFGFDISEYD VTYAAGDSLG VYATNSAVAV
DAWLAATGLD GSEKVDVDGA EHSLRDALTV SYDFCRVTPD LMRFVAEQCR DRSAAKRLRA
ARADLDAWLV DRNGLDVVRE FEVRADPRQW QEVLVRLTPR QFSISSSPLV SPHEVQLTVS
VVRYRGSDGG ERGGVASTFL ADRATAPLPV FLQRSPHFRP PRDGVTPMIM VGPGTGIAPF
RAFLQERRAL GHTGPNWLFF GDRHRDENFY YRDDLEDMVT DGFLRLDLAF SRDQPKPVYV
QHRMLEHGAE VWRWLERGAH LYVCGDAARM AKDVDAALTT IIRKHGGLSE SAAREYKKSL
VAGKRYLRDV Y
|
|---|
| |