| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_3158 |
|---|
| Symbol | |
|---|
| ID | 4610993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 3304497 |
|---|
| End bp | 3305987 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639792829 |
|---|
| Product | carotenoid oxygenase |
|---|
| Protein accession | YP_939142 |
|---|
| Protein GI | 119869190 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.350488 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTGG AACGCCTGCA GACCTTCGCC TCGACGCTGC CCGCCGATGA CGACCATCCG
TACCGCACCG GGCCGTGGCG CCCCCAGGTC ACCGAGTGGC GGGCCGACGA CCTCGAGGTC
GTCGCCGGCG AGGTGCCTGC CGATCTCGAC GGCATGTACC TGCGCAACAC GGAGAACCCG
CTGCATCCGG CCGCGACGGC CTACCACCCG TTCGACGGTG ACGGGATGAT CCACATCGTC
GAGTTCGGCG GGGGAAAAGC GGCCTACCGC AACCGCTTCG TCCGCACCGA CGGCTTCCTC
GCCGAGAACG AGGCCGGGGG ACCGCTGTGG GCCGGGTTCA TCGAGATGCC CTCGGCCGCC
AAACGCGCCG ACGGCTGGGG CGCGCGCACG CGGATGAAGG ACGCGTCGAG CACTGACGTC
GTCGTCCACC GCGGGACGGC GCTGACCAGT TTCTACATGT GCGGCGACCT CTACCAGGTC
GACCCGTACA CCGCCGACAC CCTCGGCAAG GAGACCTGGC ACGGCGACTT CCCGGACTGG
GGGGTGTCGG CGCATCCCAA GATCGACCCG GTCACCGGGG AGCTGCTGTT CTTCAGCTAC
AGCAAGGAAG CGCCTCATCT GCGCTACGGC GTGGTCGACA AGGACGCGAA CCTGGTGCAC
CACACCGACG TCGCGCTGCC CGGGCCGCGG ATGCCGCACG ATATGGCGTT CACCGAGAAC
TACGTGATCC TCAACGACTT CCCGCTGTTC TGGGAGCCGT CGCTGCTGAA GCAGGACATC
CACGCACCGG TCTTCCACCG CGACATGCCG TCGCGTTTCG CCGTGCTGCC CCGCCGCGGT
GACCAGTCGC AGGTGCGGTG GTTCGAGACC GACCCGACGT ATGCCCTGCA CTTCGTCAAC
GCCTACGAGG ACGGTGACGA GATCGTGCTC GACGGGTTCT TCCAGGACAA CCCGTCACCG
TCGACGAAGG GCGCGAAGTC GTTGGAGGAC GCGGCCTTCC GCTACCTGGC ACTCGACGGG
TTCGAATCGC ACCTGCACCG CTGGCGGTTC AACCTCGCCA CGGGGGCGGC CACGGAGGAA
CGGCTGTCGG ACAGCCTCAC CGAATTCGGC ATGATGAACG GTGACTACCA GACCCGGCGG
CACCGCTACG TGTACGCCGC CACCGGCAAA CCGGGCTGGT TCCTGTTCGA CGGGCTGGTC
AAACACGATC TGCGCGACGG TACCGAGGAG CGGATCACGT TCGGCGACGG CGTGTTCGGC
AGCGAGACCG CGATGGCGCC GCGTCAGGAC GGCACCGCCG AGGACGACGG CTACCTCGTC
ACCCTGACCA CGGACATGAA CGACGACGCC TCCTACTGCT TGGTGTTCGA TGCCGCGCGG
ATCGCCGACG GTCCGGTGTG CAAGCTGCGG CTTCCTGAAA GAATCTGCAG CGGAACACAT
TCGACGTGGG TGTCCGGGGC TGAGCTGCGG CGCTGGCACA GCCCGCGGTG A
|
|---|
| Protein sequence | MRVERLQTFA STLPADDDHP YRTGPWRPQV TEWRADDLEV VAGEVPADLD GMYLRNTENP
LHPAATAYHP FDGDGMIHIV EFGGGKAAYR NRFVRTDGFL AENEAGGPLW AGFIEMPSAA
KRADGWGART RMKDASSTDV VVHRGTALTS FYMCGDLYQV DPYTADTLGK ETWHGDFPDW
GVSAHPKIDP VTGELLFFSY SKEAPHLRYG VVDKDANLVH HTDVALPGPR MPHDMAFTEN
YVILNDFPLF WEPSLLKQDI HAPVFHRDMP SRFAVLPRRG DQSQVRWFET DPTYALHFVN
AYEDGDEIVL DGFFQDNPSP STKGAKSLED AAFRYLALDG FESHLHRWRF NLATGAATEE
RLSDSLTEFG MMNGDYQTRR HRYVYAATGK PGWFLFDGLV KHDLRDGTEE RITFGDGVFG
SETAMAPRQD GTAEDDGYLV TLTTDMNDDA SYCLVFDAAR IADGPVCKLR LPERICSGTH
STWVSGAELR RWHSPR
|
|---|
| |