Gene Mkms_2702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_2702 
Symbol 
ID4615988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2826128 
End bp2826889 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content71% 
IMG OID639792368 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_938687 
Protein GI119868735 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0205678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCTGG GCCTGACCGG CAAACGATTC GCCGTCACCG GCGGCACCCG CGGCATCGGC 
CGAGCGGTCG TCGAGGGTCT GCTCGCCGAA GGGGCCGTGG TCGCGTTCTG CGCACGCACC
CCCGAGGCGG TCACCGACGC GCAGGCGGAG TTGACGGCCG ACGGCGCCAC CGCCGTCGGT
GCGGCGGTGG ACGTCGGTGA CCCGACAGCG CTGACCGCCT GGGTGGGCGC CGCCGCGGAC
TCGCTGGGCG GCCTGGACGG GGTGGTGGCC AACGTCAGCG CGCTGGCGAT TCCGGAGTCC
GCGGAGAACT GGCGCGCGTC CTTCGACGTC GATCTGATGG GCACCGTGGG TCTGGTCGAC
GCCGCCCTGC CACACCTGCT GGCCGCGGGT GGCGGGTCGA TCGTGACGAT CTCGAGTGTG
TCCGGGCGGG AGATCGACTT CGCCGCCGGC CCGTACGGGA CGATGAAGGC CGCGATCATC
CATTACACCC AGGGCCTGGC GTACCGACTC GCCGCTCAGG GGATACGCGC GAACACCGTC
AGCCCGGGCA ACACGTACTT TCCCGGCGGG GTGTGGACCT CGATCGAGGA GCACAACCCG
GAACTGTTCG CCACGGCGCT CGCACTGAAC CCGACCGGCC GCATGGCGAC CCCGCAGGAG
GTGGCCAACG CGGTGCTGTT CCTCAGCAGT TCCGCGGCCA GCTTCGTCAC CGGTACGAAC
CTGCTCGTCG ACGGAGCGCT GACGCGCGGC GTGCAACTCT GA
 
Protein sequence
MDLGLTGKRF AVTGGTRGIG RAVVEGLLAE GAVVAFCART PEAVTDAQAE LTADGATAVG 
AAVDVGDPTA LTAWVGAAAD SLGGLDGVVA NVSALAIPES AENWRASFDV DLMGTVGLVD
AALPHLLAAG GGSIVTISSV SGREIDFAAG PYGTMKAAII HYTQGLAYRL AAQGIRANTV
SPGNTYFPGG VWTSIEEHNP ELFATALALN PTGRMATPQE VANAVLFLSS SAASFVTGTN
LLVDGALTRG VQL