Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_2121 |
Symbol | |
ID | 4613480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | + |
Start bp | 2244810 |
End bp | 2246399 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639791786 |
Product | major facilitator superfamily transporter |
Protein accession | YP_938109 |
Protein GI | 119868157 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.360369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0488476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCTC TCAACGACGC AGAGCGCGCA GCCATGTTCC GCGACGCCGA AGGCCGGTCC AAGCGCGCGC AGACGACGGG TCAACCGATG GGCTCCGCAC CGACGTCCGT CGGGCGCGCG AAGACATCGA CCTGGTTACC GTCACGGCGC TTCTTCGCCG CGGTGATCGC CATCGCCGGC ATGCAGTTGA TGGCCACGAT GGACGGCACC ATCGCCATCG TCGCGCTCCC CAAGATCCAA AACGAGCTGA TGCTGTCCGA CGCGGGCCGC AGCTGGGTCA TCACGGCCTA CGTGCTGACC TTCGGCGGCC TGATGCTCCT CGGCGGCCGC CTCGGCGACA CCATCGGCCG TAAGCGCACC TTCATCGTGG GCGTCGCGTT GTTCACCATC GCCTCGATCC TGTGCGGTAT CGCCTGGGAC GAGGTCACGC TGGTGATCGC CCGGCTGTTA CAGGGCGTCG GTGCCGCAAT CGCTTCGCCG ACCGCATTGG CGCTCGTCGC CACCACCTTC CCGAAAGGCC CGGCCCGCAA CGCGGCCACC GCGGTGTTCG CCGCGATGAC CGGCGTCGGC TCGGTGATGG GCCTGGTCGT GGGTGGGGCG CTCACCGAGG TGTCGTGGCG GCTGGCGTTC CTGGTGAACG CACCCATCGG CTTGCTGATC GTCTACTTGG CGCACACCGC GCTCCGTGAG ACGCACAAAG AGCGGCTCAA GCTCGACGCC ACCGGCGCGC TGCTCGCGAC GCTGGGTTGC ACCGCCGCCG TGTTCGGCTT CTCGATGGGT CCGGAGAAGG GTTGGCTCTC GTCGGTCACC ATCGCGTCGA TCGCTGCCGC CGGCGTCTTC CTGCTCGCCT TCATCTTCGT CGAGCGCTCT GCGGAGAACC CCGTGGTGCC GTTCGTGCTC TTCAAGGACC GCAACCGGCT CGCCACGTTC GCCGCGGTGT TCTTGGCCGG TGGCGTGATG TTCACCCTCT CGGTGCTGAT CGGCCTGTAC GTGCAGGACA TCCTCGGCTA CAGCCCGCTG CGCGCCGGGA TCGGCTTCAT CCCGTTCGCC ATCGCGATGG GTATCGGGTT GGCCGTCTCC TCGCAGCTGG TGCCGATTCT GCCGCCGCGG ATCCTGGTGA TCTCCGGCGG CGTGCTGGTG CTGGGCGCCA TGATCTACGG CTCGACGCTC AACAGCGGCA TCCCGTACTT CCCGAACCTG GTGATCCCGC TCGTGGTCGG CGGTATCGGA ATCGGAATCA TCTTCGTCGC GCTGATGCTG TCGGCCATCG CCGGTGTCGG TTTCGACCAG ATCGGCCCTG TGTCGGCGAT CACGCTGATG CTGCAGAATC TCGGCGGCCC GGTCGTGCTG GCGGTCATCC AGGCGGTGAT CACCTCCCGC ACGCTGTACC TCGGCGGCAC CACCGGACCG GTCAAGAACA TGGACGGCAC CCAGATCGCC GCGCTCGACG CCGGTTACAC CTACGGGCTG CTGTGGGTGG CCGCGGTGGC GGTCCTCGTG GGTGGTGCGG CACTGCTGAT CGGCTACACC TCCCAGCAGG TCGCGCACGC CCAGGAGGTC AAGGACGCGC TCGACGCCGG TGAGCTCTGA
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Protein sequence | MTALNDAERA AMFRDAEGRS KRAQTTGQPM GSAPTSVGRA KTSTWLPSRR FFAAVIAIAG MQLMATMDGT IAIVALPKIQ NELMLSDAGR SWVITAYVLT FGGLMLLGGR LGDTIGRKRT FIVGVALFTI ASILCGIAWD EVTLVIARLL QGVGAAIASP TALALVATTF PKGPARNAAT AVFAAMTGVG SVMGLVVGGA LTEVSWRLAF LVNAPIGLLI VYLAHTALRE THKERLKLDA TGALLATLGC TAAVFGFSMG PEKGWLSSVT IASIAAAGVF LLAFIFVERS AENPVVPFVL FKDRNRLATF AAVFLAGGVM FTLSVLIGLY VQDILGYSPL RAGIGFIPFA IAMGIGLAVS SQLVPILPPR ILVISGGVLV LGAMIYGSTL NSGIPYFPNL VIPLVVGGIG IGIIFVALML SAIAGVGFDQ IGPVSAITLM LQNLGGPVVL AVIQAVITSR TLYLGGTTGP VKNMDGTQIA ALDAGYTYGL LWVAAVAVLV GGAALLIGYT SQQVAHAQEV KDALDAGEL
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