| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_2087 |
|---|
| Symbol | |
|---|
| ID | 4613641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 2208776 |
|---|
| End bp | 2209498 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639791752 |
|---|
| Product | beta-Ig-H3/fasciclin |
|---|
| Protein accession | YP_938075 |
|---|
| Protein GI | 119868123 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.154881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.529139 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGA CGTCGAGCAA GACAACGTTG GTGAGCAGCA CCCGGCCGCA CGCACGCCGT
AGGACGATGG CCGCCGCCGG CCTGAGCGCC CTGGCGATCC TCGGCGTCGC GGCCTGTTCG
AGCGAAGAGG CCGGGAGCAA CGCCTCCTCG GCGACGAGCG CGGCCTCGTC GGCCGTCGAA
TCCGCCACCT CGTCGGCGCC GACGTCGAGT GCGGCCGCCG ACCCCGCCGC GAACCTGGTC
GGTTCGGGCT GCGCGGCCTA CGCCGAGCAG GTGCCCAGCG GACCGGGTTC GGTCGCCGGG
ATGGCCCAGG AGCCCGTGAC GGTGGCGGCG TCGAACAACC CGATGCTCAA GACGCTGTCG
CAGGCGCTGT CCGGTCAGCT GAACCCGAAC GTGAACCTGG TCGCCACCCT CGACGGCGGT
GAGTTCACCG TCTTCGCCCC CACCGACGAC GCGTTCGCCA AGCTCGACCC CGCCACCATC
GAGACGCTGA AGACGGATTC GGACCTGCTC ACCAGCATCC TGACCTACCA CGTCGTGCCG
GGTCAGGCCG CTCCCGATCA GGTGCCCGGC GACCACAAGA CCGTTCAGGG CGCCAACGTC
ACCGTCACCG GCGAGGGCGA GGCCATCAAG GTCAACGAGG CCGGCCTGGT CTGCGGCGGC
GTGCAGACCG CCAACGCCAC GGTCTACATG ATCGACACCG TGCTGATGCC GCCGGCGAAC
TGA
|
|---|
| Protein sequence | MKTTSSKTTL VSSTRPHARR RTMAAAGLSA LAILGVAACS SEEAGSNASS ATSAASSAVE
SATSSAPTSS AAADPAANLV GSGCAAYAEQ VPSGPGSVAG MAQEPVTVAA SNNPMLKTLS
QALSGQLNPN VNLVATLDGG EFTVFAPTDD AFAKLDPATI ETLKTDSDLL TSILTYHVVP
GQAAPDQVPG DHKTVQGANV TVTGEGEAIK VNEAGLVCGG VQTANATVYM IDTVLMPPAN
|
|---|
| |